Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00289 AATGGTTAGGAAGGCGGGGCTGTGTGGTGCAGGAACAGTAAAGATAAGAATGAATTAGATTGGGCTTTTGGTTGCAGGTGGTGGTGGGTGGGCCCAATAAGTATTATTGTGGTTGGGGGAGGCAGCGGGGAAAATGGGAGCGAGAAGCAGAGGCGGCATTGGTGCTGCCATCTTAATCTCAGTGGTCCTCAGTCTGAGCATCTATTTCATCCGTCACCGGCGTTCCAAGTCGTCTAGGGCCAGGAAGAGGGGAATCATCGACGCCATCGGCAACACCCCTCTCATTCGGATCAGCAGCCTCTCCGACGCCACTGGTTGCCAAATTCTGGGCAAATGCGAGTTCTTAAACCCCGGAGGCAGCGTCAAAGACCGCGTTGCTCTTCAAATCATTGAAGAGGCTCTGGAATCTGGGCAGCTACGTCCTGGTGGAATCGTCACTGAAGGGAGTGCCGGAAGCACTGCCATTAGCATTGCCACTGTTGCTCCTGCCTTCGGATGCAAAACCCATGTCGTTATACCTGATGATGCTGCTCTTGAGAAGTCTCAAATACTCCAAGCCCTTGGGGCAACCGTTGAAAGAGTCCGTCCCGTCTCCATTACTCATCAAGACCATTTTGTCAATATTGCAAGAAGACGGACCTCCGACTTTGCATTCACTGCCGGAGACGACTCCCACACTCAACATTCTCAAGGTGCCTTTTTTGCTGACCAGTTTGAAAACCTAGCCAACTTCAGGGCCCATTATCAGGCTACAGGTCCTGAGATTTGGCAACAGACCCATGGAAACTTAGATGCATTTGTTGCAGCTGCAGGCACTGGTGGTACTCTCGCTGGTGTTTCTACCTTTCTTCAGAAAAAGAATCCAAACATTAAGTGCTACCTCATAGATCCTCCTGGCTCTGGTTTGTTCAACAAGGTAACTAGGGGAGTCATGTTCACCAAAGAGGAGGCTGAAGGACGAAGACTTAAGAATCCATTTGACACTATAACCGAAGGAATTGGAATTAACAGAATAACAAGGAATTTTGCAATGGCAAAGCTTGACGGTGCCTTTAGAGGCACTGATAGGGAGGCTGTTGAAATGGCTAGGTTTCTTTTGAAGAACGATGGACTCTTCCTTGGGAGTTCTTCTGCTATGAACTGTGTTGGTGCAGTTAGAGTAGCACAGGCAATCGGCCCTGGCCACACAATTGTAACCATTCTCTGCGACAGTGGAATGAGACATTTGAGCAAATTCTATAATCCTGAATACTTGTCTCAGCTTGGTTTGACACCGAGAGCCACTGGATTGGAGTTCATAGGCATCAAATGAGTAGGATTCTTCTGAGATTTGAAATTTAAATGTCACTGGCTCTGCTATATCACTTGAGTGCTGAATGCCACCTTTGAATGAGAGTGGCCACGTACAAGGTAAGAGCTATGTTCATTGTAAGAACATGAAACTAATGCTTTGTCTCATATGTCCAATTACAATCACCTGGGAAGCTTTTATTCGAGAAGGATATTGTGGTGATTGACATTATAGGACATTATACTATACATCGTTTTCGGGGGAGTAGTATTTCTGGCCAATTATTTGTTAGACTGCATGATTTATTTAAGGCTAAATGCGTATTTCCA 1620 0.466 MGARSRGGIGAAILISVVLSLSIYFIRHRRSKSSRARKRGIIDAIGNTPLIRISSLSDATGCQILGKCEFLNPGGSVKDRVALQIIEEALESGQLRPGGIVTEGSAGSTAISIATVAPAFGCKTHVVIPDDAALEKSQILQALGATVERVRPVSITHQDHFVNIARRRTSDFAFTAGDDSHTQHSQGAFFADQFENLANFRAHYQATGPEIWQQTHGNLDAFVAAAGTGGTLAGVSTFLQKKNPNIKCYLIDPPGSGLFNKVTRGVMFTKEEAEGRRLKNPFDTITEGIGINRITRNFAMAKLDGAFRGTDREAVEMARFLLKNDGLFLGSSSAMNCVGAVRVAQAIGPGHTIVTILCDSGMRHLSKFYNPEYLSQLGLTPRATGLEFIGIK 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00289 392 Pfam Pyridoxal-phosphate dependent enzyme 43 359 IPR001926 -
Pste8g00289 392 SUPERFAMILY Tryptophan synthase beta subunit-like PLP-dependent enzymes 39 378 IPR036052 -
Pste8g00289 392 PANTHER CYSTATHIONINE BETA-SYNTHASE 40 373 - -
Pste8g00289 392 ProSitePatterns Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 67 85 IPR001216 GO:0006535
Pste8g00289 392 FunFam Cysteine synthase, putative 45 74 - -
Pste8g00289 392 FunFam Cysteine synthase 201 365 - -
Pste8g00289 392 FunFam Cysteine synthase A 75 200 - -
Pste8g00289 392 Gene3D - 45 365 IPR036052 -
Pste8g00289 392 Gene3D - 75 200 IPR036052 -
Pste8g00289 392 CDD CBS_like 46 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00289 Pste-Chr8 1584532 1586518 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00289 45 366 Miscellaneous Gene Families AT3G04940 31.481 3.80e-37 135
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g00289 8 1584532 1586518 Pste8g00289 8 1584532 1586518 ECH