Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00280 ATGGCACATTGTTCACCCTCATGGATTTTTTTTTCCTGCACATCTAGATTGGTAAAACCTGGGGGACTATTAATTTACAGTACATGCTCCATAGATACTGAAGAGAATGATGATAGGGTAGCGGCATTTCTTGTAAGACATCCGGATTTCCGCATTGATACTGTAGACGGATATGTTCCTCCTGATTTTGTGACAAGCAGTGGTTTCTTTTTCTCCAACCCAGTTAAACATTCACTAGATGGCTCCTTTGCAGCTCGTTTAATACGAGCTTTATAGAATAAGTTTTTGGGAAGCTATCCTCTGTGACTCTATTCCCAATTGGATGACATTCGGTGAAAAATAAAGAGGCTGCTATGAGTAGTGGCTGTTCTGGTCTGTCTGTTCAACTCTTTGCTTTGAAATCGAGGATTTACCTTCAGTGAGATACTGTGCTTGCAGAGCAGACATTCTGATTTCTCACCATAGAAAAGATATGTATGAGATAGTCAACAAGTTCTATTAATCACCAGGAACTTTGGAAGGATGATGGATTGATGATCCTTAAAAAAAGTACAGATACAAAGAAGGTTAAATTGTAAAGTTCTCAATGGAATGTCGAAGCTTCAAAGATTTCTCCAGATTAATCCATATTCTAGCACAGCTTCAAGAAATTCCTTTAGTGTAATGTGAACTAAGAGTTTTGTTTTTACTGTTATGCTGCTAACTACGGTATGATATCATTGATGTTACTGGTTGCAAATTAAGTAGCACGGACACGGTTTTCTTTCATCTTCTTTAAATTAAATAAATATCAAAGTCAT 800 0.37 MAHCSPSWIFFSCTSRLVKPGGLLIYSTCSIDTEENDDRVAAFLVRHPDFRIDTVDGYVPPDFVTSSGFFFSNPVKHSLDGSFAARLIRAL 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00280 91 Gene3D Vaccinia Virus protein VP39 10 90 IPR029063 -
Pste8g00280 91 Coils Coil 84 91 - -
Pste8g00280 91 PRINTS RNA (C5-cytosine) methyltransferase signature 21 37 IPR023267 GO:0001510
Pste8g00280 91 PRINTS RNA (C5-cytosine) methyltransferase signature 72 89 IPR023267 GO:0001510
Pste8g00280 91 PANTHER NOP2 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING 15 87 IPR023267 GO:0001510
Pste8g00280 91 Pfam 16S rRNA methyltransferase RsmB/F 14 87 IPR001678 GO:0008168
Pste8g00280 91 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 9 89 IPR029063 -
Pste8g00280 91 ProSiteProfiles SAM-dependent MTase RsmB/NOP-type domain profile. 1 90 IPR001678 GO:0008168
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g00280 8 1546435 1547633 Pste8g00280 8 1546435 1547633 ECH