Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00224 AGCTTTACGTGTTATTATCATTTTCCTGTTGCTATAAATACCCTTCCCTTTCCCTCTCCTTCCTCTGCTCCATTGCTTCTCAATTCTCAGTTCTCAGTTCTCAGTTCTCAGTTCTCATTTGGATTTGGAACAAGCAACAGTAGTGGGTTTGTGGTGCTGTACTGTGCTGCAATTTCCTTTCATACAATCCGATCCTTTTGAGGTTGTTAGAGAACATAAAAGGATGACTGTGGGAGCAGGGATATGTGTTGCAAATGGGAACTTGATGGTATTGGGAAAGAAAGTGCTGAGTAATGTCCATGACAAGGTTGTTGTTACCCCTGCATGTGGCGGTGCTTTGCTCAATGGAGCATTCATTGGATTTGGGGTTGAATCCCATCACAAGGCTAGCCGCACAATCTTCCCAATCGGCAAGCTTCAGGGATTGCGGTTTATGTGTGTTTTCCGGTTCAAGATGTGGTGGATGACGCAGAGAATGGGCACTAGCGGACAAGAAATCCCCATTGAAACTCAGTTTTTGCTTGTTGAAGCACACGATGGCTCTTATATTGATGGAGGAGAAGACCAAGCTTCTGCTACCTATGCAGTTTTCTTACCCCTTCTCGAAGGAGATTTCAGAGCAGTTCTTCAGGGGAATGATCAAAACGAGATTGAGATCTGTGTGGAAAGTGGTTGTCCTGCTGTGGAGGAATTTGATGGGACTCATTTGGTTTATGTTGGAGCTGGATCTGACCCATACCAAGTCATAACAAATGCCGTCAAGACTGTTGAGCAACACCTACAGACCTTTGCACATCGCGAGCGAAAGAAGATGCCAGATATGTTGAACTGGTTTGGATGGTGTACATGGGATGCTTTCTACACTAATGTCACTTCAGAGAATGTGAAGCAAGGATTACAGAGGTGCCTTGAGAAAGGTGGAATTCCTGCTAAGTTTGTTATAATTGATGATGGATGGCAATCTGTTGGCATGGACCCCAATGGAATTGAATGGAAATCTGATAATGCAGCCAACTTTGCAAATCGCTTAACGAACATCAAAGAGAATCACAAATTCCAGAAAGATGGCAAGGAGGGTCAACGGGTAGAGGACCCAGCTTTGGGACTTCGTCATATTATCAATGAAATCAAACTAGAGCACGATGTAAAGCACGTGTATGTGTGGCATGCAATAACAGGATATTGGGGTGGTGTTAAACCTGGGATTCCCGGCATGGAGCACTACGAGTCAAAGATGACCTTCCCTGTCTCATCTCCTGGAGTTGAGTCAAATCAACCAGACGAAGCTTTCACAACCATTGCCATCAATGGGCTTGGTCTTGTGAATCCTGAGAAAGTTTTCCACTTTTATGATGAACTCCACTCATATTTGGCATCTGCTGGTATTGATGGTGTCAAAGTTGATGTTCAGAATATCCTTGAAACTCTTGGAGCAGGACATGGTGGGAGAGTGAAACTCGCAAGGAAATACCACCAGGCATTAGAGGCTTCAATTTCTACTAACTTCCCAGATAATGGAATCATTTGTTGCATGAGTCATAACACAGATGCACTATACAGCGCAAAACGTTCAGCTGTTATTAGGGCATCAGATGATTTCTGGCCCAGAGACCCTGCATCCCACACGATTCACATTGCATCAGTGGCTTACAATACTATTTTCCTTGGAGAATTTATGCAACCAGACTGGGACATGTTTCATAGCCTTCATCCAATGGCTGAATATCATGGCGCAGCACGAGCAGTAGGGGGATGCCCAATTTATGTCAGTGACAAGCCTGGGCAGCATGACTTTGATCTTTTGAAGAAGCTTGTACTACCTGATGGTTCTATATTAAGGGCTAAACTTCCAGGAAGACCAACAAAGGATTGCTTATTTACTGATCCTGCCAGAGATGGAAAGAGTGTTCTGAAGATTTGGAACATGAATGATTTTTCTGGTGTTGTTGCGGTATTCAATTGCCAAGGAGCTGGGTGGTGCAAAGTTGGCAAGAAGAACCTTATCCACGATGAGAATCCAGGCACTGTCACCGGTTTCATCAGAGCTAAAGATGTTGACTATTTATCCAGGATAGCAGATGATAAATGGACAGGAGATGCCATTCTATATTCCCATCTTGGTGGAGAAGTGGTTTACCTTCCAAAGGAGGCATCCATCCCAATTACTTTGAAATCTCGAGAATATGAAGTTTTCACAATAGTTCCCGTGAAGGAATTGACAAATGGTGTCAAATTCGCTCCTATTGGTTTAGTAAAGATGTTCAATTCAGGAGGAGCTGTCAAAGAGATCAGCTGGGGATCTATTGAAAGTAAAAATGTAGAAATCAAAGTCCGCGGTTGTGGCCAATTTGCTACTTATTCATCAGCTCAGCCTAAGTTGGTAACAGTTGATTCAGAAGAGATAGAATTCAAGTATGAGGAAGAATCTGGATTGGTGACTATTGATTTGAGAGTACCTGAGAAAGAGTTATACCAGTGGAGCATTTCTATTGATTTTTGAGTCAGAAATTTTGTCGCTGTGAGGGGGGCATAGTCTTATATAGTTTATCCATAGTTTGTGATAATTTGACGAGTCTACGTAGACCAGTAGCAGGAACTGTGTGTGGTTCCTTCGCCTCCTTGTAAGGAAACCAGAAACAATTAATGAATATCACAAAGTTCTTTACCTATTTCTTGTGATATATACTAGAG 2691 0.4281 MTVGAGICVANGNLMVLGKKVLSNVHDKVVVTPACGGALLNGAFIGFGVESHHKASRTIFPIGKLQGLRFMCVFRFKMWWMTQRMGTSGQEIPIETQFLLVEAHDGSYIDGGEDQASATYAVFLPLLEGDFRAVLQGNDQNEIEICVESGCPAVEEFDGTHLVYVGAGSDPYQVITNAVKTVEQHLQTFAHRERKKMPDMLNWFGWCTWDAFYTNVTSENVKQGLQRCLEKGGIPAKFVIIDDGWQSVGMDPNGIEWKSDNAANFANRLTNIKENHKFQKDGKEGQRVEDPALGLRHIINEIKLEHDVKHVYVWHAITGYWGGVKPGIPGMEHYESKMTFPVSSPGVESNQPDEAFTTIAINGLGLVNPEKVFHFYDELHSYLASAGIDGVKVDVQNILETLGAGHGGRVKLARKYHQALEASISTNFPDNGIICCMSHNTDALYSAKRSAVIRASDDFWPRDPASHTIHIASVAYNTIFLGEFMQPDWDMFHSLHPMAEYHGAARAVGGCPIYVSDKPGQHDFDLLKKLVLPDGSILRAKLPGRPTKDCLFTDPARDGKSVLKIWNMNDFSGVVAVFNCQGAGWCKVGKKNLIHDENPGTVTGFIRAKDVDYLSRIADDKWTGDAILYSHLGGEVVYLPKEASIPITLKSREYEVFTIVPVKELTNGVKFAPIGLVKMFNSGGAVKEISWGSIESKNVEIKVRGCGQFATYSSAQPKLVTVDSEEIEFKYEEESGLVTIDLRVPEKELYQWSISIDF 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00224 758 PANTHER - 1 755 IPR008811 -
Pste8g00224 758 Pfam Raffinose synthase or seed imbibition protein Sip1 9 741 IPR008811 -
Pste8g00224 758 FunFam Probable galactinol--sucrose galactosyltransferase 1 201 529 - -
Pste8g00224 758 Gene3D Aldolase class I 196 528 IPR013785 -
Pste8g00224 758 SUPERFAMILY (Trans)glycosidases 198 530 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00224 Pste-Chr8 1231193 1235462 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00224 1 756 Glycoside Hydrolase AT1G55740 71.108 0.0 1096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g00224 8 1231193 1235462 Pste8g00224 8 1231193 1235462 ECH