Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00210 TTTTATTTGGGTGACAATGACATGAAGATTGACCAGGGATAAATGGAAGTTGGAGGGACTTGAGACATTATTGGGTCTGAAATGAATGGAGAAAGAGGCGCATATGAGAATGTCATCATCTTCTCTGAGGATGGGAGAGGCAGTTGAGTCGAGTGACAGCATGAACATGAACATGAACATGAACATCAACATCCCACTGATACTCAAGCCTCTGAATCTCAAAAGGACAGGGACGGTGTGGACCGCAGTGGCACACATAGTGACAGGGGTGATAGGATCGGGAGTGCTGTCACTGGCATGGAGCACTGCACAGCTTGGGTGGCTTGCAGGTCCCCTTTCCGTCCTTGTAATTGCTTCAATCACTCTTTTCTCATCTTTTCTTCTATGCAACACATATCGCCATCCCCATCCAGAGTACGGTCCCAACAGAAGTTCCTCTTACCTTGATGTTGTCCATTTGCATTTAGGAATAACTAATGGACGCCTCAGTGCCCTTCTTGTCCACTTAAGTTTGTATGGTTTTGCTATTGCCTTTGTCATCACAACAGCTATCAGCTTAAGCACAATCCAAAATTCATTTTGTTACCACAACAAAGGGTTTGCAGCACCATGTCAATCCGTAGATGCATATTATATGATGCTTTTTGGGGCTTTCCAAATTGTTCTCTCACAGATACCCAACTTCCATAACATCCAATGGTTGTCGGTTGTTGCTGCAATTATGTCTTTTACTTATTCTTTCATCGGATTGGGCCTTTCCATTGCACAAGTCATAGAAAAAGGATATGCTGAGGGTAGCATTGGAGGAATCAGTACCTCCAGTGGAGCCGAAAAGTTATGGCTGGTTTCTCAAGCACTTGGTGACATATCATTCTCATATCCATTCTCAACAATTCTTATGGAAATACAGGATACTCTGAAATCTCCTCCACCAGAAAACCAAACCATGAAGAAGGCCTCAGTAATAGCAGTCACTGTCACAACATTCGTGTACCTCAGTTGTGGAGGTGCTGGATATGCTGCCTTTGGTGATAATACACCAGGAAACCTTTTAACAGCGTTCGGATACTCCAAGTCTTATTGGCTTGTGAACTTTGCTAATGCCTGTATAGTGGTTCACCTAGTTGGTTCATACCAGGTGTATAGCCAGCCACTTTTTGCAACTGTTGAGAATTGGTTCCGTTTTAAATTCCCAGATAGTGAATTTGTAAATCACACATATATCTTGAAACTCCGGTTGCTGCCTACCTTTGAACTTAATTTTCTCAGCCTGTCTTTCCGAACTGCTTATGTTGCATCAACAACAGTGATTGCAATGATCTTTCCCTACTTCAATCAGATTTTGGGGGTTCTTGGTAGCTTAATTTTTTGGCCGTTAACCATATATTTTCCAGTGGAGATTTACTTGAGTCAGTCCAGTACAGTAGCGTGGACGACTAAGTGGGTCCTGCTTCGGACTTTCAGCATTTTTGGCTTTGTGTTTGGATTGTTCACTCTCACTGGATGTGTTAAAGGAATAGTCACCGAAAAAATAAGCTGAGAAGCTCTGAGAACTCTCCCGTTATTGGGGCTGAGAAAATTGATTCAGATAGCTATCTCCTTTGAATTCTGTTTGTCAAAACTAGCTTTTAAGCTAGTTGGAAATTGAAATGTTATTTAAAAATTGAAAAGTTAGTTTAAAGTTGAAAAATTATATGTAAGTGTTTGTAAAACTAATTTATCAACTAGTTCAAGTTATAAAATGG 1745 0.4109 MEKEAHMRMSSSSLRMGEAVESSDSMNMNMNMNINIPLILKPLNLKRTGTVWTAVAHIVTGVIGSGVLSLAWSTAQLGWLAGPLSVLVIASITLFSSFLLCNTYRHPHPEYGPNRSSSYLDVVHLHLGITNGRLSALLVHLSLYGFAIAFVITTAISLSTIQNSFCYHNKGFAAPCQSVDAYYMMLFGAFQIVLSQIPNFHNIQWLSVVAAIMSFTYSFIGLGLSIAQVIEKGYAEGSIGGISTSSGAEKLWLVSQALGDISFSYPFSTILMEIQDTLKSPPPENQTMKKASVIAVTVTTFVYLSCGGAGYAAFGDNTPGNLLTAFGYSKSYWLVNFANACIVVHLVGSYQVYSQPLFATVENWFRFKFPDSEFVNHTYILKLRLLPTFELNFLSLSFRTAYVASTTVIAMIFPYFNQILGVLGSLIFWPLTIYFPVEIYLSQSSTVAWTTKWVLLRTFSIFGFVFGLFTLTGCVKGIVTEKIS 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00210 484 PANTHER OS05G0424000 PROTEIN-RELATED 50 467 - -
Pste8g00210 484 Pfam Transmembrane amino acid transporter protein 47 478 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00210 Pste-Chr8 1183805 1186289 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00210 46 461 Organic Solute Cotransporters AT1G77380 51.435 2.88e-152 441
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g00210 8 1183805 1186289 Pste8g00210 8 1183805 1186289 ECH