Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00097 ATGAAGAAGGTGGAGATGGCGATGGTGATGGTGATGGTGTTGGGGTTGGGGATGGCGGCATCGGGGGCAGTGCCAGCACACAACATAACGAGGATGCTGGGGACGCACCCGGGATTCTCGACATTCAGCCACTACCTGACGGCGACACACCTGGCAGAAGAGATAAACCGGAGGCAGACAATAACGGTGCTGGCACTGGACAATGCAGCCATGTCGGCCCTCCTGGACAAACACTACTCCCTCCCGACCATTAAAAACATCCTCTCACTCCACGTCCTCGTCGACTACTTCGGGGCCAAAAAGCTCCACCAGATCAACAACAGCACCACCCTTGTCTCCTCCATGTTCCAGGCCACGGGAGCAGCAGCTGGAACTGCCGGCTACGTCAACATCACCAACCTCAAAGGCGGCAAGGTTGCCTTCGCCGCCGAAGACAACGACGGCTCCCTCCACTCCTTCTACGTCAAATCCATCAAGGAAATGCCCTACTACATATCCGTCCTCCAGATCAGCGCCGCCATAAGCTCAGCCGACGCCGAAGCACCCACTGCCGCCCCCTCCGCCATCGACCTCATCTCCATCATGTCTAAACAGGGCTGCAAGGCCTTCGCCGACCTCCTCAGAGCCTCCAAGGCACTTCCCACCTTCACGGAAAACATCGACGGCGGTCTAACGGTTTTCTGCCCCACCGACACCGCTGTCAACGATTTCGCTCCCAAATACAAGAACCTCAGTGAGGCCCATAAGGTATCCCTTCTTCTGTATCACGGCGTTCCCGTCTACCAGTCCCTTCAGATGCTAAAGTCCAGCAACGGCATCATCAACACTCTCGCCACCGAGGGAGCCAACAAGTACGATTTCACTGTTCAGAATGAGGGTGAAGACGTCAGTCTCAAGACCAAAGTCAACACCGCCACCATCCTAGGGACCCTCATTGATCAAGATCCCTTCGTCGCTTACAAGTTAAACAAGGTCCTCATGCCCCGCGAGTTGTTCAAGCCCACCCACGTTTCCGATCCCCCCGCCCACTCCCCCTCCCAACCCAATAAGAAGGGTATCAAGCAGCCTGCCCATCAGGATGCCGCCGATTCTCCCTCCGACGGCCCCTCCGACGACTCCGACGACCAGAAGGCTGCTGATGACACCAATGGGGTTTCCCACTCCTTCACATTCCCCGCACTCTTCTTCTCTCTCTTTACCCCCTTTCTTCTTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTTAG 1245 0.5679 MKKVEMAMVMVMVLGLGMAASGAVPAHNITRMLGTHPGFSTFSHYLTATHLAEEINRRQTITVLALDNAAMSALLDKHYSLPTIKNILSLHVLVDYFGAKKLHQINNSTTLVSSMFQATGAAAGTAGYVNITNLKGGKVAFAAEDNDGSLHSFYVKSIKEMPYYISVLQISAAISSADAEAPTAAPSAIDLISIMSKQGCKAFADLLRASKALPTFTENIDGGLTVFCPTDTAVNDFAPKYKNLSEAHKVSLLLYHGVPVYQSLQMLKSSNGIINTLATEGANKYDFTVQNEGEDVSLKTKVNTATILGTLIDQDPFVAYKLNKVLMPRELFKPTHVSDPPAHSPSQPNKKGIKQPAHQDAADSPSDGPSDDSDDQKAADDTNGVSHSFTFPALFFSLFTPFLLLPLPLPLPLP 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00097 414 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 10 384 IPR033254 -
Pste8g00097 414 Gene3D FAS1 domain 187 329 IPR036378 -
Pste8g00097 414 SUPERFAMILY FAS1 domain 185 329 IPR036378 -
Pste8g00097 414 ProSiteProfiles FAS1/BIgH3 domain profile. 26 193 IPR000782 -
Pste8g00097 414 SMART fasc_3 225 329 IPR000782 -
Pste8g00097 414 FunFam Fasciclin-like arabinogalactan protein 2 25 167 - -
Pste8g00097 414 FunFam Fasciclin-like arabinogalactan protein 10 180 329 - -
Pste8g00097 414 Pfam Fasciclin domain 38 111 IPR000782 -
Pste8g00097 414 Pfam Fasciclin domain 200 328 IPR000782 -
Pste8g00097 414 SUPERFAMILY FAS1 domain 33 145 IPR036378 -
Pste8g00097 414 Gene3D FAS1 domain 26 178 IPR036378 -
Pste8g00097 414 ProSiteProfiles FAS1/BIgH3 domain profile. 187 326 IPR000782 -
Pste8g00097 414 MobiDBLite consensus disorder prediction 334 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00097 Pste-Chr8 566874 568118 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g00097 8 566874 568118 Pste8g00097 8 566874 568118 ECH