Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g02349 TTCAGCTTGGACCCCAGAGCGGAGGAGTTCAGACCCGCTTCCGCTTCCAGTGAATGTGAATGTGAATGTGAATGTGAATGTGAATGGTACCCTCTTCCTATGCTTCCTTTCACTTTGCCTCTCCCTCTTCCCCTATCTCTCCCACCTCAACCTCAACCTCAACCTCAACCTCAACCTCAACCTCACCTCTCCTCCACCCGCTCCCTCCTCCTCACCCCCGTCCCCCTCCTCTCCGTCTCCCTCCTCCGCGCACAACTCCAGGCCTTTGGCGACGTCCGACACCTGGAAACCGATGCCCTCCGCCACGGCATCCTCACCGTCCACTTCTACGACCTCCGCCATGCACAGTCGGCCTTCTCCGCCATCCCCTCCATGCATCCCATCTCCGCCCACTACGTCCTCCCTTCCTCCAACTCCCTCCCTGACGCCCACAACCAAGGCTCCCTCCTTGTCTTCAACTTGGACCCTCACCTCTCCACCCATCTCCACCTCCACCTCCGTCCTCTCTTCCGACCCTTCGGTCCCATCAAACAATTCAGAGATACCCCGTGGAAACACACCCAGAGATTCGTTGAGTTCTTCGACATCAGACACGCCGCCAACGCCCTCAAACACTTGAACGGCAAGCATTTTCACGGCAAACCCCTTCTTATTCAGTTCAGTTCACCCTCTCACCCTTCTCCACATACTCGAACCCCCAAGCCCCAACTCCGCCACTGGAAGGGAAAGCAACCAAAGAAACACGAAACTCGCTTTCTAATCAAAGAGGTTGCTCCCACCGATACTAGAACTACTGTCATGATCAAAAACATTCCCAACAAGTACAGTCAGAAGTTGCTATTAAACATGCTCGATAACCACTGCATTCACTGCAACCAGCACATTCCAGACTCCCATCATCAGCCGCTATCTTCCTACGACTTCGTCTACCTCCCCATTGATTTCAACAACAAGTGCAACGTGGGGTATGGGTTCGTCAACATGACGTCCCAGGAGGCAGCAGTGAGACTCTACAAGGCTTTTCATCTTCAACATTGGGAGGTTTTTAATTCAAGAAAAATCTGCCAAGTCACCTATGCCAGAGTTCAGGGTTTGGAAGCATTGAAAGAGCACTTCAAGAACTCAAAGTTCCCATGCGAGATGGAGCATTACTTGCCAGTGGTATTTTCACCGCCTCGAGATGGGAGGGAACTGACGGAGCCACTTGCAATAGCTGGAGCGGGGAACAGGCAGCATGAAGCAATGCTGAGTGATGATGACGACGTGGGTGGCAGCAAAAGCGGCGGCGGCGGCGGCGGCGGCCTCCAGGAGGCCGAGTAGAGCAGACTGCATTTAAGGTGGTTGAGCAACGAGCCACACCTGTGTTCACACACACCTCCTTCCTATTCCCTACCACTACGAACCTCTTGCTGCTCACTGCTCACTCCTCACCTTTCCTCCCATTTCTTCTTTTTTCTTTCTTTCTATCTAATTTCCTGCTTTGTCTTAGTCCAATTATTCAGCTTGTAATTTTCCCTTTCTAGCTTCTGCCTCTTTACTATTTATTTTATTACTTCGG 1558 0.5218 FSLDPRAEEFRPASASSECECECECECEWYPLPMLPFTLPLPLPLSLPPQPQPQPQPQPQPHLSSTRSLLLTPVPLLSVSLLRAQLQAFGDVRHLETDALRHGILTVHFYDLRHAQSAFSAIPSMHPISAHYVLPSSNSLPDAHNQGSLLVFNLDPHLSTHLHLHLRPLFRPFGPIKQFRDTPWKHTQRFVEFFDIRHAANALKHLNGKHFHGKPLLIQFSSPSHPSPHTRTPKPQLRHWKGKQPKKHETRFLIKEVAPTDTRTTVMIKNIPNKYSQKLLLNMLDNHCIHCNQHIPDSHHQPLSSYDFVYLPIDFNNKCNVGYGFVNMTSQEAAVRLYKAFHLQHWEVFNSRKICQVTYARVQGLEALKEHFKNSKFPCEMEHYLPVVFSPPRDGRELTEPLAIAGAGNRQHEAMLSDDDDVGGSKSGGGGGGGLQEAE 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g02349 439 Pfam RNA recognition motif 2 263 373 IPR007201 -
Pste7g02349 439 CDD RRM3_EAR1_like 263 364 IPR034458 -
Pste7g02349 439 FunFam Terminal EAR1-like 1 224 369 - -
Pste7g02349 439 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 147 223 IPR000504 GO:0003723
Pste7g02349 439 SMART rrm1_1 265 349 IPR000504 GO:0003723
Pste7g02349 439 SMART rrm1_1 148 219 IPR000504 GO:0003723
Pste7g02349 439 MobiDBLite consensus disorder prediction 45 60 - -
Pste7g02349 439 MobiDBLite consensus disorder prediction 407 439 - -
Pste7g02349 439 PANTHER RNA RECOGNITION MOTIF-CONTAINING 260 385 - -
Pste7g02349 439 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 166 216 IPR000504 GO:0003723
Pste7g02349 439 MobiDBLite consensus disorder prediction 45 65 - -
Pste7g02349 439 Gene3D - 255 370 IPR012677 -
Pste7g02349 439 MobiDBLite consensus disorder prediction 222 245 - -
Pste7g02349 439 SUPERFAMILY RNA-binding domain, RBD 149 342 IPR035979 GO:0003676
Pste7g02349 439 Gene3D - 141 237 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g02349 Pste-Chr7 22166057 22167940 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g02349 7 22166057 22167940 Pste7g02349 7 22166057 22167940 ECH