Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g02346 TTGAAGTGGAAGAAAGGGGTGAACACAGTTGACTTGACCTTGCTGGATTCCTTCTAACAGCACTCTTCCTCTCTCTGCTATAATTCAATTGCAGTTCTTGTTGAAACAATGCATCCGGAGGTATACGAAAAAGTCTCACTGTCTTTCTTGGTCTGCTGTCGGTGTTTGTGACCTCGAAATTTCGTTCACCAATTTTGGGTTGAATTTTGCATGCCCTCTAGTTTTTTTCAGTTTCACAGAAAATTTCTTGGTTGCTTAGTTGAGTGACTATTTCAGAGTTGCGAACTTTTGTCCCTTTTGACTATTATACTTTGATTCCCTCTCCAAGTTATATAAACCGGTTGTATGTGTTTTGGAGTTGCAGTTAGAGACTTGGACAGTTTTGGTTGGTGTTCTGTGCATCTTGGTCTTTATTCTGAAGGAGTTTGTCATGGGAGGGAAGAGTTCAAAAGGGAGTGGTAGGAGGTATGAGTTTGGTGCTTCTTCATCTTCATGGGATAATAACTATGGTGGATACCCTCCTCAATCACCATACCCTTCTTATCAAACACCTCAGCACCACCGTACATCAGCATCGGCTCCATTTTATGACTACTCACAACCAAAAAGGAAGTTGGATAAGAAGTATTCCAAGATAGCTGATAATTATCGTTCTTTGGATGAGGTTACTGCTGCACTTGCAAATGCTGGGCTGGAATCTTCTAATCTCATAGTTGGCATTGATTTCACAAAGAGCAATGAGTGGACAGGAAAGAGGTCATTCAATCGGAAAAGTTTACATGACATTGGAAGTGGTCAAAACCCTTATGAGCAAGCAATTTCTATTATTGGGAAAACCTTATCTGCTTTCGATGAAGATAACTTGATTCCTTGTTTTGGATTTGGAGATGCGTCTACACATGACCAAGATGTGTTTAGTTTCTATTCAGAAGAGAGGTTTTGCAATGGGTTTGAGGAAGTTCTGACACGATACAGACAAATTATTCCTTATCTCAAACTTGCAGGACCCACTTCATTTGCCCCTATTATTGAAATGGCTATGACTATTGTTGAGCAAAGTGGTGGCCAATATCATGTCTTGCTGATAATTGCAGATGGACAGGTGACTAGAAGCATTGACACACAGCATGGCAACTTAAGTCCACAAGAGAAGAACACAATAGACGCAATAGTTAAAGCCAGTGAGTATCCACTGTCAATAGTTTTGGTGGGAGTTGGAGATGGACCATGGGATATGATGAGGGAATTTGACGATAACATCCCTTCTCGTGCATTTGACAATTTTCAGTTTGTGAATTTTACTGAAATAATGACAAGGAACGTAGATTCTACAAGAAAAGAGACGGATTTTGCCCTTTCAGCTTTGATGGAGATACCTTCTCAATATAAGGCAACAATAGAGCTTGGCATATTGGGTGCTAGGAGGGGACATTCACCAGATAGGGTTGCTCTACCCCCACCTCTTTATGGTAGGACTTCTTCCAGCATCAGCACAAAATCTACAAGGTCAAACAGTTTTCAGCAGAGGACACCTTCACGTTCTAGCTATGATAGTGATGTTCACAGAGAACCTTCATCAAGTTCTTTATATGATAATAAGATTTGCCCCATTTGTCTTAGCAATGGGAAGGATATGGCCTTTGGTTGTGGGCATCAGACTTGTTGTGAGTGTGGAGAAGATCTTCAATTCTGTCCCATTTGCCGGAGCACAATCCATACTAGAATAAGGCTTTATTAGTTAGCTTTGCTGCAGAAGTGTTTTCTATGGAAACTTAATTCGTTTGCAGAATAAGGTTAGTTGTAGAAGTTTCATAACGTTAGAAACTGAATGTGCTATTGTATGCATAGTTGTGAATTAAGTTGATCCGTACGCAGGGCTGCGAAATGATGTTCAGAGTTGGTTTCACTCTTTTCTTTGATGGTTTCTTGTCCATTAAAAACTGCTTTGGCAATTTTGAGGCGAAACTTGGATGTCCAATTAGGAAGGTTTATTTACACAAATTGTCCTTCCCCGTTGTATATATATGTCCTCGGAAGGCGTCATGTTTTTAAATAAACTGCCTGTATAAAAAATCACTTGCATGGTTCTAAAGAGCATTTATTGTTTCGGGTCTTCTACATTGTCTTCCTACAAAACATGAATCAGTATAGTTTGATCTAATCTTTTCAAGTGGATAGCTGGGACCCTTCGAGGATAAAATACGTA 2206 0.3985 MGGKSSKGSGRRYEFGASSSSWDNNYGGYPPQSPYPSYQTPQHHRTSASAPFYDYSQPKRKLDKKYSKIADNYRSLDEVTAALANAGLESSNLIVGIDFTKSNEWTGKRSFNRKSLHDIGSGQNPYEQAISIIGKTLSAFDEDNLIPCFGFGDASTHDQDVFSFYSEERFCNGFEEVLTRYRQIIPYLKLAGPTSFAPIIEMAMTIVEQSGGQYHVLLIIADGQVTRSIDTQHGNLSPQEKNTIDAIVKASEYPLSIVLVGVGDGPWDMMREFDDNIPSRAFDNFQFVNFTEIMTRNVDSTRKETDFALSALMEIPSQYKATIELGILGARRGHSPDRVALPPPLYGRTSSSISTKSTRSNSFQQRTPSRSSYDSDVHREPSSSSLYDNKICPICLSNGKDMAFGCGHQTCCECGEDLQFCPICRSTIHTRIRLY 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g02346 435 MobiDBLite consensus disorder prediction 1 54 - -
Pste7g02346 435 Pfam Zinc finger, C3HC4 type (RING finger) 389 429 - -
Pste7g02346 435 PANTHER COPINE FAMILY PROTEIN 1 42 412 - -
Pste7g02346 435 SUPERFAMILY vWA-like 91 274 IPR036465 -
Pste7g02346 435 MobiDBLite consensus disorder prediction 12 53 - -
Pste7g02346 435 SUPERFAMILY RING/U-box 384 431 - -
Pste7g02346 435 SMART VWA_4 90 293 IPR002035 -
Pste7g02346 435 MobiDBLite consensus disorder prediction 335 385 - -
Pste7g02346 435 Pfam Copine 115 328 IPR010734 -
Pste7g02346 435 MobiDBLite consensus disorder prediction 347 371 - -
Pste7g02346 435 ProSiteProfiles Zinc finger RING-type profile. 392 425 IPR001841 -
Pste7g02346 435 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 369 435 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g02346 Pste-Chr7 22118346 22122867 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g01967 3 13402446 13407199 Pste7g02346 7 22118346 22122867 PCT