Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g02160 TCACACTCCAATGCAGTTTTCATCAACCTATCTACTCAGCAGCTGCCACGTGGCACTACACATATACTTAGCCACATATCTAAAATTGCTATCCCCTCCTCTCCCTTCGTAGTCTCACTATCAAATATCAATCAATGCAATAATATAACATAACATCCTTACTCTTTCAAGTTTTAACATCGTTTTGCAGCTGCAGCCATGGAAACAGGCATAGCATGCTACACCCGCGGCCCTTTCTTGCCTACTGTTTCTTCCAAGCACTCCATCGCTCCATCTTTTGGCTTCACGACTCTCAAATCAAGCTCTTTCTTCGGAGAATCGCTAAGAGTGTCATCCAAATCAACACTAAAGGTCTCAAAGACAAAGGATACTTCACTCGTAACCAGATGTGAAATTGGTGACAGTCTGGAAGAATTCCTTACAAAAGCAACACCAGATAAGGGGCTGATCAGGTTGTTGGTGTCCATGGGAGAAGCATTAAGAACAATTTCCTTCAAAGTGAAGACGGCTTCTTGTGGTGGAACACAATGTGTTAATACTTTTGGGGACGAGCAGCTTGCAGTGGATTTACTGGCTAATCAACTTCTTTTTGAGGCCTTAAATTACTCCCATTTTTGCAAGTATGCTTGCTCTGAAGAAAATCCTGAGCTCCTGGACATGGGAGGTCCAGTTGAAGGTGGATTTAGTGTTGCATTTGATCCCCTTGATGGCTCCAGCATTGTGGACACGAATTTCACAGTAGGCACCATCTTTGGTGTGTGGCCTGGAGATAAGTTGACTGGGGTCACTGGAAGAGATCAAGTTGCTGCAGCCATGGGGGTTATGGGTCCTAGAACAACATACGTGCTTGCTCTTAAGGACTTCCCAGGCACCCATGAATTTCTTCTGCTTGATGAAGGTCAGCATGATGCCATAAGATTTATGGGAATCTATAGATTGCTTGAGCATGTCAAAGAGACCACAGAAATTGGTGAAGGAAAATTGTTCTCCCCAGGAAATTTGAGAGCTACAACGGACAACCCCGATTATGCTAAGTTGGTCGATTACTATGTCAATGAAAAGTACACATTGAGATATACTGGAGGAATGGTGCCGGATGTCAACCAGATTATTGTAAAAGAAAAAGGCATCTTCACCAACGTGGCATCTCCGTCGGCCAAAGCAAAGTTGAGACTGTTGTTTGAGGTAGCTCCATTGGGGTTCTTGATTGAAAAAGCAGGAGGTTACAGCAGTGATGGTCATCAGTCTGTGCTAGACAAAGTCATCACTAACGTTGATGAGAGAACTCAAGTTGCTTATGGATCCAAGGATGAGATCATCCGGTTTGAAGAAACCTTGTACGGTAAATCCAGGCTCAAGGGTGGTGTAGCTGTTGGAGCGGCTGCTTAATCTCTTTAAACCCGCAATTAGTTGTCAATTTTTATCTTCTTTTATAAAAAAATATATGTTATTTTCTGACAAGTACAAACAATTTAGTCATATGTTTCTTGTTTATCTCCACAACGAAGTTAATTTTTTGTTGGTAGACCGATTAGATCTGAACAAAAACAAAAATCTAAATGAAAAGTTGCTGTCTTTA 1579 0.4199 METGIACYTRGPFLPTVSSKHSIAPSFGFTTLKSSSFFGESLRVSSKSTLKVSKTKDTSLVTRCEIGDSLEEFLTKATPDKGLIRLLVSMGEALRTISFKVKTASCGGTQCVNTFGDEQLAVDLLANQLLFEALNYSHFCKYACSEENPELLDMGGPVEGGFSVAFDPLDGSSIVDTNFTVGTIFGVWPGDKLTGVTGRDQVAAAMGVMGPRTTYVLALKDFPGTHEFLLLDEGQHDAIRFMGIYRLLEHVKETTEIGEGKLFSPGNLRATTDNPDYAKLVDYYVNEKYTLRYTGGMVPDVNQIIVKEKGIFTNVASPSAKAKLRLLFEVAPLGFLIEKAGGYSSDGHQSVLDKVITNVDERTQVAYGSKDEIIRFEETLYGKSRLKGGVAVGAAA 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g02160 396 FunFam Sedoheptulose-1,7-bisphosphatase, chloroplastic 254 394 - -
Pste7g02160 396 CDD FBPase 66 380 IPR000146 GO:0005975|GO:0016791
Pste7g02160 396 Hamap Fructose-1,6-bisphosphatase class 1 [fbp]. 68 382 IPR000146 GO:0005975|GO:0016791
Pste7g02160 396 Gene3D - 254 395 - -
Pste7g02160 396 Pfam Fructose-1-6-bisphosphatase, N-terminal domain 61 235 IPR033391 -
Pste7g02160 396 Gene3D - 65 240 - -
Pste7g02160 396 PANTHER FRUCTOSE-1,6-BISPHOSPHATASE-RELATED 66 380 IPR000146 GO:0005975|GO:0016791
Pste7g02160 396 SUPERFAMILY Carbohydrate phosphatase 64 379 - -
Pste7g02160 396 ProSitePatterns Fructose-1-6-bisphosphatase active site. 322 334 IPR020548 GO:0005975|GO:0042578
Pste7g02160 396 PRINTS Sedoheptulose-1,7-bisphosphatase family signature 291 311 IPR023079 GO:0005975|GO:0016791
Pste7g02160 396 PRINTS Sedoheptulose-1,7-bisphosphatase family signature 353 377 IPR023079 GO:0005975|GO:0016791
Pste7g02160 396 PRINTS Sedoheptulose-1,7-bisphosphatase family signature 195 213 IPR023079 GO:0005975|GO:0016791
Pste7g02160 396 PRINTS Sedoheptulose-1,7-bisphosphatase family signature 261 277 IPR023079 GO:0005975|GO:0016791
Pste7g02160 396 PRINTS Sedoheptulose-1,7-bisphosphatase family signature 119 134 IPR023079 GO:0005975|GO:0016791
Pste7g02160 396 PRINTS Sedoheptulose-1,7-bisphosphatase family signature 135 155 IPR023079 GO:0005975|GO:0016791
Pste7g02160 396 FunFam Sedoheptulose-1,7-bisphosphatase, chloroplastic 65 240 - -
Pste7g02160 396 Pfam Fructose-1-6-bisphosphatase, C-terminal domain 259 379 IPR044015 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g02160 Pste-Chr7 19850672 19853493 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g02160 7 19850672 19853493 Pste7g02160 7 19850672 19853493 ECH