Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pste7g02112 | ACAAAATTTTAAACGGAAACCCCTGAAAATAAGGGAACAAGAGATTTTTCATTTTTTTTTTTAATTTCACATTGGTATTGGATTTTTGTGTACTGTGTTGGGTTGGAATCGGCATGAATGGCGAGGGGAACGAAGCAATGCAAGTTGAAGTGGAGAAGGAGAGGTTGGTGTACATGTGGGGTTACCTTCCCGGAGCTCTACCGCAAAGGACGCCCTTGTTGACGCCGCTCCTGGTTAGGGTTCCGCCCCCTGCTTACTCCTGGAGGGATGTTTGCGGCGGTGGTTGTGGATTCGCCATGGCTATCTCTGAGCCTGGAAAACTCATAACATGGGGTTCAACAGACGATTTAGGCCAAAGTTATGTCACATCTGGCAAACATGGGGAAACTCCAGAGCCTTTTCCTCTTCCGGCTGAAGCAACTATTGTAAAAGCGGCATCAGGATGGGCACATTGTGTTTCTGTAACGGATGGTGGAGAAGTTTACACATGGGGATGGAGGGAATGTGTTCCCTCTGGGAAGGTGTTTGGTGAATCATTAAGTGGAGTAAGCCCTGAAAAGGATGTATCTGGAAGGCAAAATTCATTCTTGATGGAGCAAGTGAACCCTCGTTCTCAAGGTCCAAAATCTACGGGCGGAACTGCCTCTAGTACCAGTGGGGAAGAAAGTACAAAGAAAAGAAGAGTATCTTCAGCAAAGCAGACAGCTGAAACTGCATCATCTAGTGATGATACTCTGACAGCATTGCCATGTCTTGTCACACTAAACCCAGGTGTAAGAATAGCAAATGTTGCTGCTGGTGGTCGCCATACCTTAGCATTGTCGGATATAGGACAGGTGTGGGGTTGGGGCTATGGAGGTGAAGGGCAGCTTGGTTTGGGTTCTAGAATACGAATGGTGTCTTCTCCTCATCTAGTTCCTTGTATTAATTCCTCTTCTTATGGTAAAGATATATCGGCATCACTGGCTCAAGGAAGCATGAGTTCAGATGGGCAAAATTTTAGAGTTCCTGGAAGTTATATAAAGGGAATAGCTTGTGGAGGTCGACACAGTGCAGTAATCACAGATGCAGGCGATGTGCTAACATTTGGTTGGGGACTCTATGGACAGTGCGGGCAAGGTGGCACAGATGATGAACTGAGCCCAACTTGCATATCTTCCTTATTGGGTATTCGTATAGAGGGAGTCGCTGCAGGACTGTGGCATACTGTGTGTACATCTGCCGATGGTGTTGTATATGCATTTGGTGGCAACCAGTTTGGGCAGCTGGGAACTGGTGGTGATCAAGCTGAGACTATACCAAGGCTCTTGGATTGTCCGAGCTTGGAAAATGTGAATGTAAAGGGGATATCTTGTGGGGCTCGTCACACTGCTCTAATAACAGATAATGGAAAAGTCTTCTGCTGGGGATGGAACAAATATGGACAGCTTGGCCTTGGGGACGTGATTGACCGTAATATTCCTTCTGAAGTCCCCATGGAAGGTTATGTAGCTAAAAACGTTGCATGTGGCTGGTGGCATACTCTTCTTCTGGCCGAGTCACCCAGTTGATGTTATGTGGCTTCCTCGAGGCTCGTGACCCCCCAATTTTGTTAGTTAGCTTTCTTTTGTTTGGTAAAATCATGAATCCATATGCATATGTATATGTGCATACAGTAGTGGTATACATATGACATGTATATATGCTTGTATTTTTTTTTTATGTAAATCATCATGATTGGCTCTAGAATTTAAACAACATCCAATAGTGGTTTATTGTTTGAGAAGGAAAATATTGGGTCCTTTTCATCTATGTAACATTATTCTTCATAGTGTATATTTTCTTTTAATTGTATAAACTAACCTGTGTAATTGTGTAGGGGGTACGGGGTGGTTCTTTTAGCTTTCAGTATATATATCCATTGCAAGTTGGCCTTGGTCCATGCTAAATGTACGGGC | 1937 | 0.4424 | MNGEGNEAMQVEVEKERLVYMWGYLPGALPQRTPLLTPLLVRVPPPAYSWRDVCGGGCGFAMAISEPGKLITWGSTDDLGQSYVTSGKHGETPEPFPLPAEATIVKAASGWAHCVSVTDGGEVYTWGWRECVPSGKVFGESLSGVSPEKDVSGRQNSFLMEQVNPRSQGPKSTGGTASSTSGEESTKKRRVSSAKQTAETASSSDDTLTALPCLVTLNPGVRIANVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHLVPCINSSSYGKDISASLAQGSMSSDGQNFRVPGSYIKGIACGGRHSAVITDAGDVLTFGWGLYGQCGQGGTDDELSPTCISSLLGIRIEGVAAGLWHTVCTSADGVVYAFGGNQFGQLGTGGDQAETIPRLLDCPSLENVNVKGISCGARHTALITDNGKVFCWGWNKYGQLGLGDVIDRNIPSEVPMEGYVAKNVACGWWHTLLLAESPS | 478 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pste7g02112 | 478 | PANTHER | REGULATOR OF CHROMOSOME CONDENSATION | 12 | 474 | - | - | |
| Pste7g02112 | 478 | Gene3D | - | 13 | 140 | IPR009091 | - | |
| Pste7g02112 | 478 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 320 | 371 | IPR000408 | - | |
| Pste7g02112 | 478 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 426 | 476 | IPR000408 | - | |
| Pste7g02112 | 478 | ProSitePatterns | Regulator of chromosome condensation (RCC1) signature 2. | 226 | 236 | IPR000408 | - | |
| Pste7g02112 | 478 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 240 | 319 | IPR000408 | - | |
| Pste7g02112 | 478 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 68 | 120 | IPR000408 | - | |
| Pste7g02112 | 478 | MobiDBLite | consensus disorder prediction | 160 | 203 | - | - | |
| Pste7g02112 | 478 | ProSitePatterns | Regulator of chromosome condensation (RCC1) signature 2. | 306 | 316 | IPR000408 | - | |
| Pste7g02112 | 478 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 372 | 425 | IPR000408 | - | |
| Pste7g02112 | 478 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 223 | 252 | - | - | |
| Pste7g02112 | 478 | Gene3D | - | 197 | 286 | IPR009091 | - | |
| Pste7g02112 | 478 | PRINTS | Chromosome condensation regulator RCC1 signature | 104 | 117 | IPR000408 | - | |
| Pste7g02112 | 478 | PRINTS | Chromosome condensation regulator RCC1 signature | 226 | 242 | IPR000408 | - | |
| Pste7g02112 | 478 | PRINTS | Chromosome condensation regulator RCC1 signature | 361 | 379 | IPR000408 | - | |
| Pste7g02112 | 478 | PRINTS | Chromosome condensation regulator RCC1 signature | 421 | 442 | IPR000408 | - | |
| Pste7g02112 | 478 | ProSitePatterns | Regulator of chromosome condensation (RCC1) signature 2. | 412 | 422 | IPR000408 | - | |
| Pste7g02112 | 478 | SUPERFAMILY | RCC1/BLIP-II | 19 | 476 | IPR009091 | - | |
| Pste7g02112 | 478 | MobiDBLite | consensus disorder prediction | 160 | 182 | - | - | |
| Pste7g02112 | 478 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 371 | 422 | IPR000408 | - | |
| Pste7g02112 | 478 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 425 | 473 | IPR000408 | - | |
| Pste7g02112 | 478 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 320 | 367 | IPR000408 | - | |
| Pste7g02112 | 478 | Gene3D | - | 287 | 477 | IPR009091 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pste7g02112 | Pste-Chr7 | 19373776 | 19380078 | Dispersed/Wgd |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Pste7g02112 | 7 | 19373776 | 19380078 | Pste7g02112 | 7 | 19373776 | 19380078 | ECH | |
| Pste7g02112 | 7 | 19373776 | 19380078 | Pste8g01361 | 8 | 7289972 | 7295808 | ECH | |
| Pste7g02112 | 7 | 19373776 | 19380078 | Pste8g01361 | 8 | 7289972 | 7295808 | PCT |