Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g02075 ATGGTTATCCAAGTGCCTAAGGAATGGTCAGGGAGAATCTGGGGAAGACAAGGGTGTAGGTTTGACAAAGAAAGAGGCAAAGGTGGATGTGAAACAGGTGATTGTGGAGGAATGTTACAATGCAACGGCATTGGAGGAGTCCCTCCTGCAACCCTAGTGGAAATGACCCTTGGAACCTCTCAATCATCATTGCATTTCTATGATGTTAGTTTGATTGATGGGTTTAACCTTCCAGTCTCAGTGAAGCCGGTGGGAGGTGGTGCTGCAGGTTGTGGTGTTGCGAGCTGTGAGGGTAACTTGAATGTCTATTGCCCTTCTGCTTTGGTTGTGGAGAGGAATGGGAAGGTTGTGGGGTGCAAGAGTGCTTGTTTGGCTGCAAAGTCAGATAGATATTGCTGCACTGGTCACTTTGCTCGAACATGCAAGCCAACTGTCTTTTCTCGTCTTTTCAAAACTGTTTGTCCAAATGCTTATAGCTATGCCTATGACCATTCGCCAGTGCTCAAGACTTGTGTGGCACCTCGCTATATTCTACGCTTGCATTCACTGTACCCCAATTCAATTTCATATATACCTGTTGTGTGCCAGAAGTTTTACCCTGTTGAATATCTAATGGCTTCAAACACCGGGAACAATGACAAGAAAGAACATGTTTTCTCTTGGACAATACAGCAGAACAAACAATTTGAGAATGCACTGGTCTTGTATGATGAAGACACCCCAGATCGGTGGCAAAATATAGCCAAAGAAGTTGGCCATAAATCTGTGGAGGAAGTGAAGAGACACTACGCAATTCTTTTAGAAGACCTTATTAATATAGAGGCGGGGCTTGTTCCGATTCCCGATTATAAGTTGTCAGAAAACATGGATATATCATGA 879 0.4403 MVIQVPKEWSGRIWGRQGCRFDKERGKGGCETGDCGGMLQCNGIGGVPPATLVEMTLGTSQSSLHFYDVSLIDGFNLPVSVKPVGGGAAGCGVASCEGNLNVYCPSALVVERNGKVVGCKSACLAAKSDRYCCTGHFARTCKPTVFSRLFKTVCPNAYSYAYDHSPVLKTCVAPRYILRLHSLYPNSISYIPVVCQKFYPVEYLMASNTGNNDKKEHVFSWTIQQNKQFENALVLYDEDTPDRWQNIAKEVGHKSVEEVKRHYAILLEDLINIEAGLVPIPDYKLSENMDIS 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g02075 292 Gene3D - 220 266 - -
Pste7g02075 292 ProSiteProfiles Thaumatin family profile. 1 171 IPR001938 -
Pste7g02075 292 SUPERFAMILY Osmotin, thaumatin-like protein 3 177 IPR037176 -
Pste7g02075 292 SUPERFAMILY Homeodomain-like 220 275 IPR009057 -
Pste7g02075 292 FunFam THAUMATIN-LIKE PROTEIN 1 1 181 - -
Pste7g02075 292 ProSitePatterns Thaumatin family signature. 26 41 IPR017949 -
Pste7g02075 292 Pfam Thaumatin family 3 172 IPR001938 -
Pste7g02075 292 ProSiteProfiles SANT domain profile. 216 263 IPR017884 -
Pste7g02075 292 SMART tha2 2 174 IPR001938 -
Pste7g02075 292 CDD SANT 220 263 IPR001005 -
Pste7g02075 292 FunFam Transcription factor SRM1 213 280 - -
Pste7g02075 292 Gene3D Thaumatin 1 180 IPR037176 -
Pste7g02075 292 PRINTS Pathogenesis-related protein signature 65 81 IPR001938 -
Pste7g02075 292 PRINTS Pathogenesis-related protein signature 12 23 IPR001938 -
Pste7g02075 292 SMART sant 217 269 IPR001005 -
Pste7g02075 292 PANTHER OS03G0233200 PROTEIN 2 176 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g02075 Pste-Chr7 19073100 19076015 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g02075 2 189 Receptor kinase-like Gene Family AT5G38280 40.306 3.33e-35 132
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g02075 7 19073100 19076015 Pste7g02075 7 19073100 19076015 ECH