Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g02070 ATGTCCTCCTATCTCCTCCTTCTTCCATCTCTTACAATTACCCTTTTCACCGTTTTCCTGGAAATCCAAAGAAGCAGCTCTGCACCCCAAAGCCCTATAGTAATGTCTCTTAAAACCCAAACAGTCCCACATGGGTTGGTTGCACTTCCAAAGCCATCCTCAGGTAAGCTCTGGTTCCACCACAACGTAACCTTAACCGTTTCACTAACCGTAGGCACGCCCCCACAGAGCGTTACCATGGTCCTCGACACAGGCAGCGAACTCTCATGGCTGCACTGCAAAAAGAACCCAAAGATAAACTCAATCTTCGACCCACACCTCTCTTCCTCCTACAACCCCACACCATGCACCTCACCCGTCTGCACCACCCGGACCCGAGACTTCCCCATACCCGCTTCCTGCGACCCGAAAAAACTCTGCCACGCCACCATCTCCTATGCAGACGGCACCTCCATAGAGGGCAACCTCGCAGGGGAGACATTTTCCATGTCCGGGTCGGGTCAACCCGGAATAATATTCGGGTGCATGGACTCTGGCTTCAGCTCCAACGCCAACGAGGACTCCAAAACAACCGGGTTAATGGGGATGAACCGCGGCTCGCTGTCGTTTGTCACCCAAATGGGGTTTCCGAAATTCTCTTACTGCATCTCCGGCCGCGACGCCTCCGGGGTGTTACTGTTCGGGGAGGCCACGTTCAAATGGCTAGGACCGTTAAAGTACACGCCTTTGGTGAAAATGAAAACCCCATTGCCGTACTTCGACCGGGTGGCGTACACGGTTCGGTTATTGGGCATGCGAGTGGGGCAAAAACCGCTGCAGGTGCCGAAGGAAATATTCGCGCCGGATCATACAGGGGCGGGGCAGACCATGGTGGATTCGGGCACCCAATTCACTTTCCTTCTGGGGTCGGTTTACACTGCTCTGCGGAACGAGTTTGTGGCGCAGACGAAAGGGGTGCTGAGCCTTTTGGAGAATCAGAATTTTGTGTTTGAAGGGGCGATGGATTTGTGTTTTAGAGTTAGAGGGAGTAGCATTCCGGCGGTTCCGGCGGTGACAATGGTGTTTGAAGGGGCGGAGATGAGTGTTTCTGGGGAGAGGTTATTGTATAGGGTGAGGGATGAGGTGTATTGTTTCACGTTTGGTAATTCTGATTTGTTGGGAATTGAGGCGTATGTGATTGGACACCATCATCAGCAGAACGTGTGGATGGAGTTTGACTTGGTCAACTGGAGAGTTGGATTTGCTGAGACAAGGTGTGAACTTGCCAGTGGAAGACTTGGCTTGTGA 1287 0.526 MSSYLLLLPSLTITLFTVFLEIQRSSSAPQSPIVMSLKTQTVPHGLVALPKPSSGKLWFHHNVTLTVSLTVGTPPQSVTMVLDTGSELSWLHCKKNPKINSIFDPHLSSSYNPTPCTSPVCTTRTRDFPIPASCDPKKLCHATISYADGTSIEGNLAGETFSMSGSGQPGIIFGCMDSGFSSNANEDSKTTGLMGMNRGSLSFVTQMGFPKFSYCISGRDASGVLLFGEATFKWLGPLKYTPLVKMKTPLPYFDRVAYTVRLLGMRVGQKPLQVPKEIFAPDHTGAGQTMVDSGTQFTFLLGSVYTALRNEFVAQTKGVLSLLENQNFVFEGAMDLCFRVRGSSIPAVPAVTMVFEGAEMSVSGERLLYRVRDEVYCFTFGNSDLLGIEAYVIGHHHQQNVWMEFDLVNWRVGFAETRCELASGRLGL 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g02070 428 CDD pepsin_A_like_plant 64 419 IPR034161 -
Pste7g02070 428 ProSiteProfiles Peptidase family A1 domain profile. 65 415 IPR033121 -
Pste7g02070 428 PANTHER ASPARTYL PROTEASE-RELATED 19 419 IPR001461 GO:0004190|GO:0006508
Pste7g02070 428 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 80 91 IPR001969 GO:0004190|GO:0006508
Pste7g02070 428 Pfam Xylanase inhibitor N-terminal 67 228 IPR032861 -
Pste7g02070 428 FunFam Aspartic proteinase PCS1 56 229 - -
Pste7g02070 428 Pfam Xylanase inhibitor C-terminal 257 415 IPR032799 -
Pste7g02070 428 Gene3D Acid Proteases 234 423 IPR021109 -
Pste7g02070 428 SUPERFAMILY Acid proteases 65 419 IPR021109 -
Pste7g02070 428 FunFam Aspartic proteinase PCS1 233 423 - -
Pste7g02070 428 Gene3D Acid Proteases 60 228 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g02070 Pste-Chr7 19033918 19035204 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g02070 66 420 Miscellaneous Gene Families AT1G44130 22.632 7.02e-17 80.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g02070 7 19033918 19035204 Pste7g02070 7 19033918 19035204 ECH