Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g02057 ATTGAAGATGGAGTCCCCTGAAGGGAAGAAGACGGGTTTGAAGCTTCCGGCAGGGATGTCCGGAAGCGCACTGAGGCTGGAGACATGTTCTCAGGGCTCCATCTCAAGTCTTAACTCTCCTTCCTCTCTGCGGTCCATATCGAACCTGACATCTCCTTCAAAATGCAGTGACAGGTTCATTCCCTGCCGCTCCTCCTCCAGGCTCCACACCTTCGGCCTCCTCGACAAGCCCTCCCCCGTCAAGGAAGGGAGTAACGACTCCTATTCAAGGTTGTTGAAATCCGAACTCTTTGGTTCTGACTTTGCTTCTCCTTCTCTGCTTTCTTCTTCCCCTGCAGGTGCTGCTGCTGCTGCTCCTCCCTCCCCCCTCAGTCCCAGTCAGAACATGCTCCGCTTCAAAACCGCCGCACCTTCCTCCCCTTACTCTTCTCCCTCCATTTTGGGACACAACAATGCCTTCTCTTCCACCCCTCCTCCCAAGCCTCCCCGTAAAGTTCTGGATGCACCATCACTTCAAGATGACTTTTACTTGAATTTGGTGGACTGGTCCTCACAAAATGTTCTTGCTGTGGGGCTAGGCACTTGTGTTTATCTATGGAGCGCTTCAAACAGCAAAGTAACTAAGTTATGTGACTTGGGGCCTTATGATGGAGTCTGCTCTCTCCAGTGGACACGGGAGGGTTCTTTTATATCTATTGGTACAAATCTTGGTCAAGTTCAGATTTGGGATGGCACTCAGTGTAAGAAGGTCAGAACCATGGGTGGGCATCAGACAAGAACTGGTGTCTTGTCATGGAACTCTCGCATTTTGGCTTCAGGGAGCAGAGATAGGAACATACTTCAGCATGACATGAGGGTTTCAAGTGACTTTGTTAGCAAGCTTGTCGGTCACAAGTCAGAGGTATGTGGATTGAAATGGTCTTGTGATGACAGAGAACTTGCTTCTGGTGGCAATGATAATCAGCTCCTGGTATGGAATCAGCACTCGCAGCAACCAGTTTTGAGACTTACGGAGCACACAGCTGCTGTGAAGGCCATTGCTTGGTCACCTCACCAAAACAGTCTCCTTGTGTCTGGAGGCGGAACTGCTGATAGGTGCATTCGTTTTTGGAACACTACAAATGGCCATCAATTGAACTGTGTTGACACTGGAAGCCAGGTCTGCAACCTTGCTTGGAGTAAAAATGTGAATGAGCTAGTAAGTACTCATGGGTACTCCCAAAATCAGATTATGGTGTGGAAATATCCGTCATTGGGGAAGGTTGCAACTCTAACTGGCCATAGCATGCGTGTGCTGTACCTTGCAATGTCTCCTGATGGCCAGACAATAGTAACTGGTGCGGGGGATGAGACTCTACGGTTTTGGAATGTTTTCCCATCAATGAAATCAGCTGCCCCAGTTAAAGATACAGGCCTTTGGTCACTGGGGCGCACCCAAATTCGATGATGGCTTATGCTGTCGTGAAATAATATCGTCAGTAAAAGTTTGTAACATTTGATGCCATGCAACAAGGAAGAGGAAGAAAGGATCTGTATATGAAATAATATTGCCATTATTGTCAGTGCAAGTTTGTAACATATATATCAAACACGGATATCTGTATATAAAGTATTTGCCAATTTGTCATTTTTGTCATTGCAAGTTTGTAACATATATCAAACACGAACTTATAATACATTGTAGAGTTAGCC 1692 0.4675 MESPEGKKTGLKLPAGMSGSALRLETCSQGSISSLNSPSSLRSISNLTSPSKCSDRFIPCRSSSRLHTFGLLDKPSPVKEGSNDSYSRLLKSELFGSDFASPSLLSSSPAGAAAAAPPSPLSPSQNMLRFKTAAPSSPYSSPSILGHNNAFSSTPPPKPPRKVLDAPSLQDDFYLNLVDWSSQNVLAVGLGTCVYLWSASNSKVTKLCDLGPYDGVCSLQWTREGSFISIGTNLGQVQIWDGTQCKKVRTMGGHQTRTGVLSWNSRILASGSRDRNILQHDMRVSSDFVSKLVGHKSEVCGLKWSCDDRELASGGNDNQLLVWNQHSQQPVLRLTEHTAAVKAIAWSPHQNSLLVSGGGTADRCIRFWNTTNGHQLNCVDTGSQVCNLAWSKNVNELVSTHGYSQNQIMVWKYPSLGKVATLTGHSMRVLYLAMSPDGQTIVTGAGDETLRFWNVFPSMKSAAPVKDTGLWSLGRTQIR 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g02057 479 ProSiteProfiles Trp-Asp (WD) repeats profile. 422 455 IPR001680 GO:0005515
Pste7g02057 479 ProSiteProfiles Trp-Asp (WD) repeats profile. 292 333 IPR001680 GO:0005515
Pste7g02057 479 SUPERFAMILY WD40 repeat-like 165 455 IPR036322 GO:0005515
Pste7g02057 479 FunFam FIZZY-related 2 isoform 1 157 457 - -
Pste7g02057 479 PANTHER CELL DIVISION CYCLE 20 CDC20 FIZZY -RELATED 43 472 IPR033010 GO:0010997|GO:0097027|GO:1904668
Pste7g02057 479 MobiDBLite consensus disorder prediction 30 54 - -
Pste7g02057 479 MobiDBLite consensus disorder prediction 132 152 - -
Pste7g02057 479 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 292 324 - -
Pste7g02057 479 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 422 455 - -
Pste7g02057 479 SMART WD40_4 201 241 IPR001680 GO:0005515
Pste7g02057 479 SMART WD40_4 157 198 IPR001680 GO:0005515
Pste7g02057 479 SMART WD40_4 375 412 IPR001680 GO:0005515
Pste7g02057 479 SMART WD40_4 285 324 IPR001680 GO:0005515
Pste7g02057 479 SMART WD40_4 244 281 IPR001680 GO:0005515
Pste7g02057 479 SMART WD40_4 415 454 IPR001680 GO:0005515
Pste7g02057 479 SMART WD40_4 327 369 IPR001680 GO:0005515
Pste7g02057 479 MobiDBLite consensus disorder prediction 132 165 - -
Pste7g02057 479 ProSitePatterns Trp-Asp (WD) repeats signature. 356 370 IPR019775 -
Pste7g02057 479 CDD WD40 195 454 - -
Pste7g02057 479 Gene3D - 155 458 IPR015943 GO:0005515
Pste7g02057 479 ProSitePatterns Trp-Asp (WD) repeats signature. 441 455 IPR019775 -
Pste7g02057 479 Pfam Eukaryotic translation initiation factor eIF2A 317 454 IPR013979 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g02057 Pste-Chr7 18881777 18884637 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g02057 289 455 Miscellaneous Gene Families AT5G08390 23.295 5.27e-09 57.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g02057 7 18881777 18884637 Pste7g02057 7 18881777 18884637 ECH