Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g02029 GGTTGGGCATGGAAGAAAGCCCTGGTGGAGGCAGAAAGCGAAGCCACCCCTCTTCGTGTTCTGCTTCTCCAATTCCAAAGCGCCTGAACTTCCCTTCCTTCCAAGATGTTCCGAATCTCCCTTCCAACGTCAAATCCCTCTGCCACCTGATCGCCACCACTCCCGCCGCCACCATTGAACAATCCCTCCAGTCCGGCGCCATCTCCGTCACCCCTCACGACGTCCAACAAGTCCTCAAACTCTCCTACGGCTTCCCCGGGCAAGCCGTAAAGTTTTTCCGATGGAGCGGCCGGCACCTCAACAACAAACACACCCCTTACTCCTGGAACCTCGTGGTGGACCTCTTAGGTAAAAATCGCTTCTTTGACGCAATGTGGGATGCTATTAAGTCCATGAACAAAGAGGGGTTACTCTCCCTGGCTACATTCGCCTCTGTTTTCGGCAGTTACGTGGCCGCAGATCGTGTTCGGGAAGCTATTGTGGCGTTTGAGGTTATGGAGAATTATGGGTGTGTGAGGGATGTTGTTGCCTTGAATTCCTTACTGAGTGCAATTTGTAGAGATGGTAAGACTGTTGATGCCTGTGACTACCTGCAGATTGCTAAGAAGTTTGTTAGGCCGGATGCCGACACATACGCTATTTTAATGGAGGGGTGGGAAGGGGATAGGGACAGAGAAAGGGGTGTGGTTGGTGCTAAGGAGACATTTGCTGAGATGGTCATTGAGATTGGATGGAATCCTGTCAATGTGCCCGCTTATGATTCTTTTTTGTGTACCCTTCTAAGAGGCCCTGATGGATTGCTTGAGGCTATCAAGTTTTTTGATTCAATGAGGGATAGGAGGTGTTACCCTGGTGTGAGGTTTTTGAAGGTTGCCTTGGATGAGTGTGTCAAGTCTCATGATCTTAGGACTGCTGAGTTTTTCTGGGAGGTGTTGGTGCTCGTGGGGAAGGTGTTGCAGCCCACCACTGAGATGTACAATTTGATGATTGCTTTGTATTGTTATCGTGGTGACACTGATGCTGCGCGCAGGATGCTTGATGATATGGTTTACCAAGGGGCTTTTCCTGATGTGCTGACTTATAACTTGTTGTTTAAGTTCTTGATCAAGGGGAGGAAGTTAAGGGACGCTTCAGCAATGTTTGCTGAGATGATCAAGAACGAGTGTGTGCCTGAGCAGGATAATTGTGATGCCGCGGTTAAGGCTTATGTGGATTGTGGGGATCCGGTTATGGCTATCAAGGTTTGGAAATGCTTGGTGGAGAATTATCAGAATGATTTGGAGCGGACTGCAAATTTTCTGGTTGAGGGGCTTCGTGATTTGAATAGGGTGCCAGAGGCTGTTAAGTATGCTGATGATATGCTTGGCAGGGGAATCAGGTTGTCCTCTAACACGTTGTCAAAGCTCAAACAAAGTCTTGCAAAAGAAAGAAAAGAATATGTGTATGAAGATCTTTTGAGAAAGGGGAAATTTCATTACTTAATATTAGTCCCGAATTTGAATGTTTTGTGTATGGCTGGTAAAGAGGTTAAGAATTTTGAAGTGTATTATTGTAAGGATTTGGAGTGGATGGCAAATTTTTTGTTCGTGTGGCTTTGTGATCTGACTAGGGTCCTGGAGGCTGTTAGGTATGCCAAGGATATGATTGGAAGAGGAATCAGGTTGTCATCTTCCACATTAACAAAGTTCAGACAAAGCCATGTTAAAGAAAGAAAGAATTTGTCATGTTTGGTTGGAACTGACGATAATGAGAATAGTTATTCCAAACCTCTCTCCAACTTTGCTGCCCCTGCCCTCCCAAGC 1802 0.465 MEESPGGGRKRSHPSSCSASPIPKRLNFPSFQDVPNLPSNVKSLCHLIATTPAATIEQSLQSGAISVTPHDVQQVLKLSYGFPGQAVKFFRWSGRHLNNKHTPYSWNLVVDLLGKNRFFDAMWDAIKSMNKEGLLSLATFASVFGSYVAADRVREAIVAFEVMENYGCVRDVVALNSLLSAICRDGKTVDACDYLQIAKKFVRPDADTYAILMEGWEGDRDRERGVVGAKETFAEMVIEIGWNPVNVPAYDSFLCTLLRGPDGLLEAIKFFDSMRDRRCYPGVRFLKVALDECVKSHDLRTAEFFWEVLVLVGKVLQPTTEMYNLMIALYCYRGDTDAARRMLDDMVYQGAFPDVLTYNLLFKFLIKGRKLRDASAMFAEMIKNECVPEQDNCDAAVKAYVDCGDPVMAIKVWKCLVENYQNDLERTANFLVEGLRDLNRVPEAVKYADDMLGRGIRLSSNTLSKLKQSLAKERKEYVYEDLLRKGKFHYLILVPNLNVLCMAGKEVKNFEVYYCKDLEWMANFLFVWLCDLTRVLEAVRYAKDMIGRGIRLSSSTLTKFRQSHVKERKNLSCLVGTDDNENSYSKPLSNFAAPALPS 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g02029 598 MobiDBLite consensus disorder prediction 1 21 - -
Pste7g02029 598 NCBIfam pentatricopeptide repeat 357 388 IPR002885 -
Pste7g02029 598 NCBIfam pentatricopeptide repeat 322 354 IPR002885 -
Pste7g02029 598 Gene3D Tetratricopeptide repeat domain 263 431 IPR011990 GO:0005515
Pste7g02029 598 Gene3D Tetratricopeptide repeat domain 79 237 IPR011990 GO:0005515
Pste7g02029 598 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 319 353 IPR002885 -
Pste7g02029 598 Pfam PPR repeat 104 134 IPR002885 -
Pste7g02029 598 PANTHER RESPIRATORY COMPLEX I CHAPERONE (CIA84), PUTATIVE (AFU_ORTHOLOGUE AFUA_2G06020)-RELATED 289 558 - -
Pste7g02029 598 Pfam PPR repeat family 318 365 IPR002885 -
Pste7g02029 598 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 354 388 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g02029 Pste-Chr7 18627882 18635885 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g02029 39 568 Glycosyltransferase AT1G05670 22.872 1.37e-15 78.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g02029 7 18627882 18635885 Pste7g02029 7 18627882 18635885 ECH