Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g01754 AAGAAGAAAATTGCAATAACTGGAGGAGTTGAAGAAATTGGAAGGGTGTGTGTGTGTTGTATGTGTAGGTGTTTAAGTGAGTTATACATTAATCAAGGTCCTCAGGTGAATGATCTGAGGGTTTCATTTTTGAGGTGAAAGAGGGTTATTTAAGAAGATGAGCGCTTCTAGGTTCATCAAGTGTGTTACTGTTGGGGATGGAGCTGTGGGCAAAACTTGTTTGCTAATCTCATACACCAGCAATACCTTTCCCACTGACTACGTGCCAACTGTTTTTGACAATTTCAGTGCAAATGTGGTCGTGAATGGAGCAACTGTTAATCTAGGATTGTGGGACACAGCCGGACAAGAGGATTATAATAGATTACGTCCTTTGAGTTATCGTGGTGCCGATTGGATTCCAGAGTTAAAACATTATGCACCTGGTGTTCCTATTATTTTGGTTGGCTCAAAACTTGACCTTCGAGATGATAAACAATTCTTTATAGACCATCCAGGTGCTGTACCAATTACCACGGTTCAGGGAGAAGAACTTAGGAAGTTGATTAATGCACCTGCTTACATTGAATGCAGTTCAAAATCACAACAGAACGTGAAAGCAGTCTTTGATGCAGCCATAACAGTTGTCCTGCAACCACCAAAGCCAAAGAAAAAGAAGAATAAAGGACAAAAGGCTTGTTCAATATTGTGATTCACTAGGTCTAATCATTTGAAGACAACCATTTGTTCTACCTAATATTGCCCTCCTCTTCTTCCATTTATTCATTCCTTTGTTGTTGAAGAAGTTGGAGTTTTTAGGATATTCATTTGACA 813 0.3936 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWDTAGQEDYNRLRPLSYRGADWIPELKHYAPGVPIILVGSKLDLRDDKQFFIDHPGAVPITTVQGEELRKLINAPAYIECSSKSQQNVKAVFDAAITVVLQPPKPKKKKNKGQKACSIL 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g01754 177 CDD Rop_like 6 158 - -
Pste7g01754 177 SMART rho_sub_3 9 160 IPR001806 GO:0003924|GO:0005525
Pste7g01754 177 ProSiteProfiles small GTPase Rho family profile. 1 157 - -
Pste7g01754 177 PRINTS Transforming protein P21 ras signature 30 46 - -
Pste7g01754 177 PRINTS Transforming protein P21 ras signature 7 28 - -
Pste7g01754 177 PRINTS Transforming protein P21 ras signature 47 69 - -
Pste7g01754 177 PRINTS Transforming protein P21 ras signature 135 157 - -
Pste7g01754 177 NCBIfam small GTP-binding protein domain 7 78 IPR005225 GO:0005525
Pste7g01754 177 Pfam Ras family 8 79 IPR001806 GO:0003924|GO:0005525
Pste7g01754 177 Gene3D - 80 172 IPR027417 -
Pste7g01754 177 PANTHER RHO FAMILY GTPASE 4 79 IPR003578 GO:0005525|GO:0007264
Pste7g01754 177 ProSiteProfiles small GTPase Rab1 family profile. 2 177 - -
Pste7g01754 177 SMART rab_sub_5 7 160 - -
Pste7g01754 177 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 157 IPR027417 -
Pste7g01754 177 Gene3D - 1 79 IPR027417 -
Pste7g01754 177 SMART ras_sub_4 4 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g01754 Pste-Chr7 16278789 16282026 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g01754 7 163 EF-hand Containing Proteins AT5G27540 24.859 1.08e-11 60.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g01754 7 16278789 16282026 Pste1g03119 1 14069752 14072416 ECH
Pste7g01754 7 16278789 16282026 Pste7g01754 7 16278789 16282026 ECH
Pste1g03119 1 14069752 14072416 Pste7g01754 7 16278789 16282026 PCT