LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pste7g01528	ATGATAATAACCACACAAAAAAATGTTACTTTAGGTTCAAATTATATGAGAAGAAAATAGCAGTTTTCAGTTCTATATATAGGCGTAGTATGAGAAACGATATGTCGAGAATGGAAGTAGCACAGGTACTGCACATGAATGGAGGTGTTGGAGACGCAAGCTATGCAAACAACTCCCTTGTTCAGCAAAAGGTGATTTATTTGACAAAGCCCATAAGAGAGGAAGCCATAACTAGCCTCTATTGCAGCATGCTCCCTAAAAGCTTGGCAATTGCAGATTTGGGTTGCTCTTCTGGACCCAACACTTTGTCTGTCGTGTCTGAATTCATCAAAATGGTCGAAAAGCTTTGTCGGGAGTTGAAGCATAAATCTCCAGAATACAAGGTGTATCTGAATGATCTTCCTGGGAATGACTTCAACAACATATTTAAGTCCCTTGACACCTTCAAAGAAAAGTTGTGTGATGAAATTGGTTCTGCAATTGGTCCATCCTACTTCTCTGGTGTTCCAGGCTTTTCCCTAACTGAAGTCTGGATTTTGTTCATTCCTCTTACAGCCTTCAATGGCTCTCTAAGAGGTGTGGAAAACAACAGGAGCAACATTTACATAGGCAGTACAAGCCCCACAAATGTAGTGAGAGCTTACTACCAACAATTTCAGAGAGATTTCTCTGTTTTTCTGAAGTGTCGAGCAGAGGAATTAGTAGAAGGAGGTCGAATGGTTCTGACAATTTTGGGAAGAAAAAGCGACGACCCATCTAGCAAAGAAGGTTGCTACATTTGGGAGCTTATGGCTACTGCTCTCAATGATATGGTCTTACAGGGAACTATAAAGAAAGAGCAATTGGATACTTTTAACATTCCTCAGTACACTCCATCTCCATCTGAAGTGAAATTGGAAGTTCTTAAAGAAGGTTCATTTTTCATCAATCGTCTAGAGGTTTCTGAAGTGCATTGGAACGCTTTTGATGAGTGGAACGCTCTTGAGTTTGAATATGAAAGGTCTGAATCACTAAGTGATGGGGGATACAATGTGGCACAGTGCATGAGGGCTGTGGCTGAACCTATGTTGGTTAGCCACTTTGGTGAAGATATCATTGAAGAGGTTTTTAGCCGTTACCAACAAATCTTGGCTGATCGTATGTCCAAGGAGAAAACTAAGTTCTTCAATTGGAACCTTCCTAAAGAAGGATCATTCAGCATCAATCGTCTAGAAGTGTCTGAGGTGAACTGGAACGTTCCTGATTATTGGAGTACTCTTAAATCTGAAAGGTCTAAATCATTGATTAGTGATAGTGGATACAATATGGCTAAGTGTTTTAGGTCTGTCACAGAACCTATGTTGATTAGCCACTTTGGAGAAGATATCAGTGAAGAGGTTTGTAGTCCTTTGCAAAAAATATTTATTGATCGTATGGAGAAGGAGAAAACTGAGTTCAACAATGTACTGCACATGAACGGGGGTGTTGGGGACGCAAGCTATGCGAACAAATCCTTTCTTCAGCAAAAGGTGATTTGTTTGACAAAGCCCATAAGAGAGGAAGCCATAAGTAGGCTCTATTGCAGCACATTCCCAGGAAGCTTGGCAATTGCAGATTTGATCATTGAAAAGCTTTGTCGGGAGCTGAAGCATAAATCTCCAGAATACAAGGTGTATCTGAATGATATTCCTGGGAATGACTTCAACATCATATTTAAGTCCTTTGACACCTTCAAAGAGAAGTTGTGTGATGAAATTGGATCTGCAATTGGTCCATCCTACTTCTTTACGGTTCCAGGTTCTTTCTATGCCAGGCTTTTCCCCAACCGAAGTTTGAATTTTGTTCATTCCTCTTACAGCCTTCATTGGCTATTTAAGTGTCGAGCAGAGGAATTAGTTGAAGGAGGTTGCGTGGTTCTGACAATTTTGGGAAGAAAAAGCGACATGGAGGATCCAGCCAAGAATAAGGTTGGATACATTTGGGAGCTTATGGCTATGGCTCTTGGACATATGGTCCTGGAGGGAATCATAAAGGAAGAGCAATTGTATACTTTTAACATTCCACAATACACTCCATCTCCCTCTGAAGTGAAATTG	2075	0.4063	MRNDMSRMEVAQVLHMNGGVGDASYANNSLVQQKVIYLTKPIREEAITSLYCSMLPKSLAIADLGCSSGPNTLSVVSEFIKMVEKLCRELKHKSPEYKVYLNDLPGNDFNNIFKSLDTFKEKLCDEIGSAIGPSYFSGVPGFSLTEVWILFIPLTAFNGSLRGVENNRSNIYIGSTSPTNVVRAYYQQFQRDFSVFLKCRAEELVEGGRMVLTILGRKSDDPSSKEGCYIWELMATALNDMVLQGTIKKEQLDTFNIPQYTPSPSEVKLEVLKEGSFFINRLEVSEVHWNAFDEWNALEFEYERSESLSDGGYNVAQCMRAVAEPMLVSHFGEDIIEEVFSRYQQILADRMSKEKTKFFNWNLPKEGSFSINRLEVSEVNWNVPDYWSTLKSERSKSLISDSGYNMAKCFRSVTEPMLISHFGEDISEEVCSPLQKIFIDRMEKEKTEFNNVLHMNGGVGDASYANKSFLQQKVICLTKPIREEAISRLYCSTFPGSLAIADLIIEKLCRELKHKSPEYKVYLNDIPGNDFNIIFKSFDTFKEKLCDEIGSAIGPSYFFTVPGSFYARLFPNRSLNFVHSSYSLHWLFKCRAEELVEGGCVVLTILGRKSDMEDPAKNKVGYIWELMAMALGHMVLEGIIKEEQLYTFNIPQYTPSPSEVKL	662

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pste7g01528	662	PANTHER	S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN	588	661	IPR005299	GO:0008168
	Pste7g01528	662	SUPERFAMILY	S-adenosyl-L-methionine-dependent methyltransferases	449	661	IPR029063	-
	Pste7g01528	662	Gene3D	-	13	354	IPR042086	-
	Pste7g01528	662	Gene3D	-	360	445	IPR042086	-
	Pste7g01528	662	Gene3D	Vaccinia Virus protein VP39	467	662	IPR029063	-
	Pste7g01528	662	SUPERFAMILY	S-adenosyl-L-methionine-dependent methyltransferases	363	451	IPR029063	-
	Pste7g01528	662	Gene3D	Vaccinia Virus protein VP39	28	356	IPR029063	-
	Pste7g01528	662	Pfam	SAM dependent carboxyl methyltransferase	486	587	IPR005299	GO:0008168
	Pste7g01528	662	Pfam	SAM dependent carboxyl methyltransferase	164	360	IPR005299	GO:0008168
	Pste7g01528	662	Pfam	SAM dependent carboxyl methyltransferase	365	452	IPR005299	GO:0008168
	Pste7g01528	662	Pfam	SAM dependent carboxyl methyltransferase	588	661	IPR005299	GO:0008168
	Pste7g01528	662	Pfam	SAM dependent carboxyl methyltransferase	45	141	IPR005299	GO:0008168
	Pste7g01528	662	SUPERFAMILY	S-adenosyl-L-methionine-dependent methyltransferases	8	361	IPR029063	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pste7g01528	Pste-Chr7	14028360	14044046	Proximal

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pste7g01528	7	14028360	14044046	Pste7g01528	7	14028360	14044046	ECH