Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g01475 TTTTCTTTTGTGGCAACAATTTCAGAATTCCTCTGCTTTACAACATTTGATTTTTTAAGTTTTTTAACAGTTTTGTCACTCTCTTTTCCTTGTTATGTTGACCACTTACTTCTTACATAGGAAGCTGCAAACATAGTACAAACTCACCTCCAAAGTCCATGCTTTTGTTCTTGCTCACAGGTCAAGAGGAGGTGGACAAACAAAGCTATAAATTTTAAAGGGGTTACTACCCTCACCTTCTGCCGAACCAAACCCACTTTTTCTGTCTTTAAGCGACTATTGTGCTGAGGGGTGAACAAGAAGATGGGTGGTGGAAATCAAGAGGCTGTCAAGCAGTTGCAGTCCCTGATGGAAAATGTGGATGAGGAGCTGAAGAACACATTCCAGAATATGCATCAGAGTTATCCCAATGAAACACTAATTCGGTTTCTCAAAGCTAGGGACTGGAATGTTGCCAAAGCCCATAAAATGTTAATTGACTGTTTGAACTGGAGGGTGGAAAATGAGATTGACAATGTTTTAAGGAAGCCTATCCCTGCAGATTTGTTCAGAGCGGTGCGGGATTCTCAACTCATAGGAATGTCTGGTTTCTCAAAGGAGGGTCTACCAGTCATTGGTGTCGGTGTTGGGCTCAGTACATATGATAAAGCATCTGACAAATATTATATACAATCACACATCCAGATGAATGAATATAGGGACCGTGTGGTCTTGGCAAGTATCTTAGACTGTTTACCTACAGCTACAAGGAAACATGAACGTTACATTGGCACCTGTGTGAAAGTCCTAGATATGACTGGTTTAAAATTTTCAGCACTGAACCAATTGAGGTTGTTGACTGCTATATCTACGATAGATGACTTGAACTACCCAGAAAAGACTGATACGTACTATATTGTTAATGCACCATATATATTCTCAGCATGTTGGAAGGTTGTAAAGCCTCTTTTGCAAGAAAGAACAAGAAGAAAAATCCAGGTGCTGCAAGGTTGTGGAAAGGAGGAATTACTGAAGGTAATGGATTATGCTTCTCTCCCACACTTCTGCAGAAAAGAAGATTCCAAATCTTCCAAACACAATGCATCAGGAAACACTGAAAATTGTTTCTCCTTCAATCATGTCTACCATCAACAACTGTACAGCTACGTCAAGCAGCAAGCTGTTGCTTTGGAGTCAATCTCACCAATCAGACAAGGGTCCTTCTATGTAGATATACCAGAGCCAGACCCAGATGATGCCAAAATTGCCAAGACCATAGAATCTGAGCTCCACAAATTGGAAAATCAGAAGAATGGCTTTATCAACTCACTAAATGGTCTTACTGTCAGTGGCCATTGAAAGCTAAGCTACTAAAGCTAGTAACAATGTTTTTTGGCCTCTCGTGAGCCACTTTTATTTTGTTGATTACCTTATGATCCCTATTGGATAAGGAGGTTTATACTTGTTCTTTATGAGGTTTGTACCTGGTTACTAGAGATGTAATATTGTAATGTTTGCATCAACTCGATGCAAAATTCTTCAAACAGACCTTAATCTCATTTCTATAACCACCTTGGGATGATAGCATATGATATCTATTCAATGTTGAACTCCTATTACTATCTCGGTACATTGTTACTTTGTCATTATTATTGG 1635 0.392 MGGGNQEAVKQLQSLMENVDEELKNTFQNMHQSYPNETLIRFLKARDWNVAKAHKMLIDCLNWRVENEIDNVLRKPIPADLFRAVRDSQLIGMSGFSKEGLPVIGVGVGLSTYDKASDKYYIQSHIQMNEYRDRVVLASILDCLPTATRKHERYIGTCVKVLDMTGLKFSALNQLRLLTAISTIDDLNYPEKTDTYYIVNAPYIFSACWKVVKPLLQERTRRKIQVLQGCGKEELLKVMDYASLPHFCRKEDSKSSKHNASGNTENCFSFNHVYHQQLYSYVKQQAVALESISPIRQGSFYVDIPEPDPDDAKIAKTIESELHKLENQKNGFINSLNGLTVSGH 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g01475 344 Coils Coil 5 29 - -
Pste7g01475 344 SMART CRAL_TRIO_N_2 35 60 IPR011074 -
Pste7g01475 344 CDD SEC14 82 247 IPR001251 -
Pste7g01475 344 Gene3D - 4 291 IPR036865 -
Pste7g01475 344 Pfam CRAL/TRIO domain 89 247 IPR001251 -
Pste7g01475 344 SUPERFAMILY CRAL/TRIO domain 80 247 IPR036865 -
Pste7g01475 344 Coils Coil 315 335 - -
Pste7g01475 344 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 78 256 IPR001251 -
Pste7g01475 344 SMART sec14_4 78 253 IPR001251 -
Pste7g01475 344 Pfam CRAL/TRIO, N-terminal domain 9 59 IPR011074 -
Pste7g01475 344 SUPERFAMILY CRAL/TRIO N-terminal domain 19 76 IPR036273 -
Pste7g01475 344 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN 1 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g01475 Pste-Chr7 13565645 13570604 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g01475 1 342 Acyl Lipid Metabolism Gene Families AT5G47730 62.974 6.26e-156 439
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g01475 7 13565645 13570604 Pste8g00267 8 1490181 1492429 PCT