Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g01467 CCAGGTTTCACTTTCATTTATTCGTTTTATTGCCTGCACCGCACTTTTTCTGATACCTCTGTATCCGCTTCAGGACTATTAATTCTATTTATTCATCATTCATTTTTTTTCACGCCTCAATTTGCATCCTCAGATTTGAGACCTACATATGTGCTTCAGTTCAATTTTATTTTATTCGTTTTTCGTGTCTTAAAGTCAAAGCTGCCGAGCCAAGCGTGAAACTGCTTTGCGTTTCGCTAATTCCCCATGTGAAAGGTCAAAATAAGGTTGGGATTTAGAGCATTTTGGTGGTGACCATGTTCCTTCTTAGGAAGCAAACCCAGCATCACCAGGGGAATGATTCCTCGTATCAGGATACGAAGGTGGTTCAACTCAGGGCTGCTCTTGGGCCCCTATCTGGGCGTAGTCTAAAGTATTGCTCAGATGCATGTCTAAGGAGATATTTAGAAGCAAGGAACTGGAATGTTGATAAAGCCAAGAAGATGCTGGAGGAATCACTCAAGTGGAGGACAACTTATAAGCCAGAAGAAATCCGTTGGGCTGAAGTAACACATGAGGGTGAGACAGGCAAAGTCTCCAGAGCTAACTTTCATGATCGACTTGGGAGGACTGTGCTTATTATGAGGCCAGGGATGCAGAACACAACATCAGCTGAAGATAATATCCGGCATTTAGTCTATCTGCTGGAAAATGCTATCCTAAATCTTTCTGAAGGTCAAGAACAAATGTCTTGGTTGATAGACTTCTCAGGATTATCACTTGGTAACGGTTTGTCTGTCAAAACAGCTCGTGATATTATTCACATTTTACAAAACCACTATCCGGAAAGGCTTGCTATTGCCTTTCTGTACAATCCACCAAGAATATTTCAGGCTTTCTGGAAGGCCGTAAGATTCTTCCTGGATCCGAAGACAGTTCAGAAGGTGAAGTTTGTTTATCCTAACAACAAGGACAGTGTGGAGCTGATGAAATCACTCTTCGACATAGACAACCTTCCAAGTGAATTTGGGGGGAAAACAAGTTTGAAGTATGACCACGAAGAGTTCTCACGATTGATGTGTGAGGATGATGTGAAAACTGCCGAGTTCTGGGGACTTGATGAGAAGCCCTTCAACCCTCCAAAGAAAGGTCATGCTGGAGCAGAGGTAGCACCAGAACCCGTATCTCTTGAGGCAGTAGTTAGTTAGTTGAACAATTTTTCAGACTGTAGTCATTTATAAACTGAAGTGATTACATATCCATCATGAAGAAACCAACAATTTAGTGGCTAATAAAGGAGCTGAATAAGCGGTATTTTGTATCTTTCGACTTTTAACCGTTTAGCTGATGCATCTTTTCATAATCGCAGCTACAATCCTCTGCTTTTAGGCAAGCAGTTGTTAATT 1385 0.4152 MFLLRKQTQHHQGNDSSYQDTKVVQLRAALGPLSGRSLKYCSDACLRRYLEARNWNVDKAKKMLEESLKWRTTYKPEEIRWAEVTHEGETGKVSRANFHDRLGRTVLIMRPGMQNTTSAEDNIRHLVYLLENAILNLSEGQEQMSWLIDFSGLSLGNGLSVKTARDIIHILQNHYPERLAIAFLYNPPRIFQAFWKAVRFFLDPKTVQKVKFVYPNNKDSVELMKSLFDIDNLPSEFGGKTSLKYDHEEFSRLMCEDDVKTAEFWGLDEKPFNPPKKGHAGAEVAPEPVSLEAVVS 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g01467 296 PRINTS Cellular retinaldehyde-binding protein signature 45 67 - -
Pste7g01467 296 PRINTS Cellular retinaldehyde-binding protein signature 162 183 - -
Pste7g01467 296 PRINTS Cellular retinaldehyde-binding protein signature 231 240 - -
Pste7g01467 296 CDD SEC14 99 240 IPR001251 -
Pste7g01467 296 SMART sec14_4 87 242 IPR001251 -
Pste7g01467 296 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 81 245 IPR001251 -
Pste7g01467 296 FunFam Phosphatidylinositol transfer protein 3 3 273 - -
Pste7g01467 296 Gene3D - 3 269 IPR036865 -
Pste7g01467 296 SUPERFAMILY CRAL/TRIO domain 83 264 IPR036865 -
Pste7g01467 296 SUPERFAMILY CRAL/TRIO N-terminal domain 6 82 IPR036273 -
Pste7g01467 296 SMART CRAL_TRIO_N_2 42 67 IPR011074 -
Pste7g01467 296 Pfam CRAL/TRIO, N-terminal domain 41 66 IPR011074 -
Pste7g01467 296 MobiDBLite consensus disorder prediction 275 296 - -
Pste7g01467 296 PANTHER GH16843P 12 270 - -
Pste7g01467 296 Pfam CRAL/TRIO domain 98 239 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g01467 Pste-Chr7 13485547 13489054 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g01467 46 234 Acyl Lipid Metabolism Gene Families AT1G55840 28.293 5.70e-12 63.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g01467 7 13485547 13489054 Pste7g01467 7 13485547 13489054 ECH