LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pste7g01376	ATTCAAGTTCATTCATCTTTTTGTTTTTTTCAGCACTGCACAAATCTAGTCCTAGTTGGTATCTCCCAGATAGAGATTTTCTTGGTAAGATTTGAAAGTTGAAACTTATGTGGCACTTCATGGTTCTCTCTCGTGTAGCTGCTATATTCATTCTTCACTGCTCATTCGTAGCCCTGGTTTCTTCATCTGGACCACCAAATGGCTGGAAAACATTGCAAGGATCTCCACCATTGGTCATAGCACGTGGTGGGTTTTCAGGGATATATCCAGATTCAAGTTCACTTGCCTACAGTTTGGCACTAGAGACTAGTGGCCCGAATGTTACTCTATGGTGTGATCTGCAATTGACAAAAGACGGAGTTGGGATTTGTTTCCCAGAGCTCAAGCTGGAGAATTCCACTGACATTTCCATTGCTTACCCAAGCAAAGCAAAGGATTACTTAGTTAATGGAGTCTCAACCCGGGGATGGTTTTCTGTAGACTACAAGTTTGAAGAACTAGTAAATGTTTCTCTTGTTCAGGGAGTGTACTCTCGGACTAGTATGTTTGATGGCAACAAGCTTCCCATTCTCACTGTTGAACAAGTAGCTAAGTTAATAAAATCACCATCTACAGGCCTGTGGTTAAATGTTCAGCATGATTCATTCTACAAGCAACAAAGTTTGAGTGTAGAGAATTTTCTACAATCTCTCTCCAGTAATGTATCTGTCAACTACATCTCATCACCTGATGTGGATTTCTTGACAAGAGTAAAATCAAGCTCTAGTTCTGGAACTGGAAACTTGATCTTCAGGATTCTTGACGAGTCTAAGATTGAACCTACAAGCAATCAGAGTTATGGTGAACTCTTGAAAAATCTCACACATATCAAGACATTTGCTTCAGGAATTCTTGTTCCCAAGGGCTATATATGGCCTGTAGACTCTGGCCTTTATCTTCAACCACATACCTCTCTTGTCTCAGATGCTCATAAAGAAGGACTGGAAGTTTTTGTCTCAGACCTTATTAATGATGTTCCATTTAGCTACAATTTCAGCTATGATCCTCTGGCTGAGTGCCTAGCTTTCATTGATAGTAATTTCTCTGTTGATGGTGTGCTATCTGACTTTCCAGTAACTCCATCTGCAGCCATAAATTGCTTTTCTGGCCTAGGGGAAAATGCTAAAAAACAAGTGGACACTTTGGTTATTACAAAATATGGAGCAAGTGGAGACAATCCTGCTTGTACGGACCTTGCATATATCCAAGCTAAATCAGATGGAGCAGATGTACTTGACTGCCCTGTTCAAATATCCAAGGATGGAACACCTTTTTGCTTAAGTTCTATAGATCTTTTAGAAAGCACAACAGTTGTTGATACAAGCTTCAAGGACCGTGCAACAACTATTCCGGAGATTAAAATTGGCAGTGGCATCTATACATTCAACTTGACATGGGATGAGATAAAAACATTGACTCCCTCCATATTGAACCCTTATGAGAAATACAGGTTGTTCCGGAATCCAATAGCCAAAAATCTAGGAAAACTTATAACCTTGTCTGACTTTTTGACCTTGACTGAAGGCTCTCGCATCCTGATCAGCATAGAGAATGCTGCCTATCTTGCACAGAAGCAGAATTTAAGTGTGACCAATGCAGTCCTTGGTGCTCTACAGAAAGCAAAACCAAGATCACCTAAAGTTATGATTCAGTCAACTCACAGTTCTGTGCTTAAAATATTCTCAGATAAATCCAAATTTGAAAGGGTTTACAAGATTGATGAAAACATTCGTGATGCTACTAACTCAGCCATTCAGGACATCAAAACTTTTGCTGATTCTGTGGTAATAGCAAAGGCATCTATTTTTCCTGAATCTTCAGCATTTCTAGTTAACTCTACAAACATTGTGGCAAGGCTACAATCATCTAAGCTCCCAGTTTATGTAGAAACATTCAGCAATGAATTTGTATCTCAAGCATGGGACTACTACTCAGATGCATCTATTGAGATAAATTCATTTGCCATTGGAGTCAAGGTTAATGGCATTATTACTGACTTCCCTAAGACGGCTAATAGATACAGGAGGAACTTGTGTTTAAAGCACGGCAACAGACCACCGTATATGATCCCTATTGAACCTGGGAAACTTTTTCAAAATATTTCAAAATTGTACCTTCCACCACTTCCCTCTCCACTCCCAGTCTTGAATGATAGTAATGTGACAGAGGCACCTTTGCCTGGTGTTTCTGGAGTAGGAGCAGTAGCTCCAGCCCCCATCACAGCATGAACAAAAAAGCAAACAACAAGACCAAGTGTTGCATCCATGCATGCCATTACCTTGTGAGCTCCTAGGAAAAGGAATTAAAAGATTTAATTTCTTTCTGTGACAAATGTTCTTTTTATTAAATTGAACATTAGAGTTATTGTGCCAGTTGCTATTGTAATGTAAGATGTGATGATTCATAGTGTTTTTCATAATAATTTGCATTTATTTGGACAGTAAAGAGAGATAGATATCATAGTAAACCCTGTTTTGTTCCAT	2522	0.3918	MWHFMVLSRVAAIFILHCSFVALVSSSGPPNGWKTLQGSPPLVIARGGFSGIYPDSSSLAYSLALETSGPNVTLWCDLQLTKDGVGICFPELKLENSTDISIAYPSKAKDYLVNGVSTRGWFSVDYKFEELVNVSLVQGVYSRTSMFDGNKLPILTVEQVAKLIKSPSTGLWLNVQHDSFYKQQSLSVENFLQSLSSNVSVNYISSPDVDFLTRVKSSSSSGTGNLIFRILDESKIEPTSNQSYGELLKNLTHIKTFASGILVPKGYIWPVDSGLYLQPHTSLVSDAHKEGLEVFVSDLINDVPFSYNFSYDPLAECLAFIDSNFSVDGVLSDFPVTPSAAINCFSGLGENAKKQVDTLVITKYGASGDNPACTDLAYIQAKSDGADVLDCPVQISKDGTPFCLSSIDLLESTTVVDTSFKDRATTIPEIKIGSGIYTFNLTWDEIKTLTPSILNPYEKYRLFRNPIAKNLGKLITLSDFLTLTEGSRILISIENAAYLAQKQNLSVTNAVLGALQKAKPRSPKVMIQSTHSSVLKIFSDKSKFERVYKIDENIRDATNSAIQDIKTFADSVVIAKASIFPESSAFLVNSTNIVARLQSSKLPVYVETFSNEFVSQAWDYYSDASIEINSFAIGVKVNGIITDFPKTANRYRRNLCLKHGNRPPYMIPIEPGKLFQNISKLYLPPLPSPLPVLNDSNVTEAPLPGVSGVGAVAPAPITA	719

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pste7g01376	719	CDD	GDPD_SHV3_repeat_1	41	341	-	-
	Pste7g01376	719	FunFam	Glycerophosphodiester phosphodiesterase GDPDL3	39	341	-	-
	Pste7g01376	719	Pfam	Glycerophosphoryl diester phosphodiesterase family	50	335	IPR030395	GO:0006629\|GO:0008081
	Pste7g01376	719	Pfam	Glycerophosphoryl diester phosphodiesterase family	365	647	IPR030395	GO:0006629\|GO:0008081
	Pste7g01376	719	ProSiteProfiles	GP-PDE domain profile.	41	342	IPR030395	GO:0006629\|GO:0008081
	Pste7g01376	719	SUPERFAMILY	PLC-like phosphodiesterases	40	341	IPR017946	GO:0006629\|GO:0008081
	Pste7g01376	719	ProSiteProfiles	GP-PDE domain profile.	358	652	IPR030395	GO:0006629\|GO:0008081
	Pste7g01376	719	FunFam	Glycerophosphodiester phosphodiesterase GDPDL3	356	652	-	-
	Pste7g01376	719	PANTHER	GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE	19	707	-	-
	Pste7g01376	719	SUPERFAMILY	PLC-like phosphodiesterases	359	652	IPR017946	GO:0006629\|GO:0008081
	Pste7g01376	719	Gene3D	Phosphatidylinositol (PI) phosphodiesterase	40	341	IPR017946	GO:0006629\|GO:0008081
	Pste7g01376	719	Gene3D	Phosphatidylinositol (PI) phosphodiesterase	357	651	IPR017946	GO:0006629\|GO:0008081
	Pste7g01376	719	CDD	GDPD_SHV3_repeat_2	359	651	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pste7g01376	Pste-Chr7	12442501	12448297	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pste7g01376	26	708	Receptor kinase-like Gene Family	AT4G26690	55.427	0.0	782

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pste7g01376	7	12442501	12448297	Pste7g01376	7	12442501	12448297	ECH