Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g01371 AGAAAGACAAAAAGATATAGAGAGAGAGCCACTATGGCGTAGAGAGAGAAAAACAACAACCAGGGTGATAGAGAGAAGGAAAGAGAAAGAGAGAGAAAAAAGAGTGTCCGTTAATTTCAGTTTTTTTATTTTAAAAAAAAAGAAAGAAGAGAAAGCAATGGTGACAGAGGAAGAAATATCCGAAGCGGTTCAGTCTCTGCTGCGAGAATCGAACCCTAGAAGCCGAAGCTTCACCACGCTGAACCAAGTGGTGGAGGAGCTTCAGGCCAAGCTCGGCCACGACCTCACTCACAAGCTCGATTTCATCACCGCGCAGATCAACCTCCTCTTCGGATCCCAACCACACAAGGACCATTTTGCCCCTCCCCCAAACCCTAATTTTCACTCTCCTCCTCTCTCTTCTGCCCCTCAGAGCTTCCCTTCTTCCAACACTGTTGTCACCGCTGCTGATGCTTCGCGTAATGAACCTCCTCCCGCTCCCGCTGTTGAAGCCAACGTTGTTCCCAAGGAAAGTACTCAAACTAAGGTGAAGAGAAGAGGTGGCCCTGGGGGTCTCACCAAACTTTGTGGTGTTTCACCTGAACTTCAGGTCATTGTTGGCCAGCCAACATTGTCAAGGACTGAGATTGTGAAGCAACTGTGGGCTTACATAAGGAAAAACAAACTCCAAGATCCCAGCAACAAAAGGAAAATAATTTGTAATGATGAGCTGCGCGTGGTGTTTGAGACAGATTGCACTGATATGTTCAAGATGAATAAGTTGCTAGCTAAACACATTATCCCCCTTGAACCAACCAAACAGCCTGTTCCAAAGAAGCAGAAGGTAGATGTGGAGTCAGGAACAAAAGGTGCTGAACCTACTCCCTCTGTAATAATATCTGATGCACTTGCTAACTTTTTTGGCATTACCGGAAGAGAGATGCTACAGTCAGAGGTTCTGAGACGAATTTGGGAGTACATAAAAGCCAACCAGCTAGAGGATCCTGTGAATCCTATGGCAATAGTGTGTGATGCGAAGCTTCAGGAGATCTTTGGCTGTGAAAGCATTCCGGCATTGGGGATACCTGAGGTTCTGGGGCGTCATCATATTTTTCGGAGTACATGATGCTGACAGAATTCTATGTGACAGATTGCATGGTGTTAATTCCAGTATAGTTGGAGATGATCTTAACCACATGTTGATATGGTTCTGTAATTTGACTGATCAGATTTGTGTTCTTAGTTCTTGTTGATAAGTTATTAGCAGAATGAAGATGTAACAGGGACAACTATTAGTTTGGGAGTGACGATGTGTTTTTAGGTCGTGCTATTGTTGCTTGTCTAACTTGGCACTTAGGTTATTAGAATGACCTGTGGGTATTCTGACAACTGTAAAATGCTGACAATAGGAAAGAAAATGATGTACAAGGTATCCTCAAACATTACTCATGCTATTTATATGTAGTTAATGAAATGCTGCTTGCCAGATGTACATTTATGATTTTGGAGAAACTTGGAAAAAGCTTATGAGAATGCTCTCTGTAAAACACTTCAAAAAGGAGAACCCAGCG 1550 0.4323 MVTEEEISEAVQSLLRESNPRSRSFTTLNQVVEELQAKLGHDLTHKLDFITAQINLLFGSQPHKDHFAPPPNPNFHSPPLSSAPQSFPSSNTVVTAADASRNEPPPAPAVEANVVPKESTQTKVKRRGGPGGLTKLCGVSPELQVIVGQPTLSRTEIVKQLWAYIRKNKLQDPSNKRKIICNDELRVVFETDCTDMFKMNKLLAKHIIPLEPTKQPVPKKQKVDVESGTKGAEPTPSVIISDALANFFGITGREMLQSEVLRRIWEYIKANQLEDPVNPMAIVCDAKLQEIFGCESIPALGIPEVLGRHHIFRST 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g01371 315 SMART swib_2 234 315 IPR019835 -
Pste7g01371 315 SMART swib_2 133 212 IPR019835 -
Pste7g01371 315 CDD SWIB-MDM2_like 137 207 - -
Pste7g01371 315 MobiDBLite consensus disorder prediction 62 91 - -
Pste7g01371 315 SUPERFAMILY SWIB/MDM2 domain 228 310 IPR036885 -
Pste7g01371 315 Gene3D SWIB/MDM2 domain 229 314 IPR036885 -
Pste7g01371 315 Gene3D SWIB/MDM2 domain 128 216 IPR036885 -
Pste7g01371 315 CDD SWIB-MDM2_like 238 309 - -
Pste7g01371 315 SUPERFAMILY SWIB/MDM2 domain 126 213 IPR036885 -
Pste7g01371 315 Gene3D - 1 58 - -
Pste7g01371 315 ProSiteProfiles DEK C-terminal (DEK-C) domain profile. 1 59 IPR014876 -
Pste7g01371 315 ProSiteProfiles SWIB/MDM2 domain profile. 233 312 IPR003121 -
Pste7g01371 315 ProSiteProfiles SWIB/MDM2 domain profile. 132 209 IPR003121 -
Pste7g01371 315 Pfam DEK C terminal domain 2 58 IPR014876 -
Pste7g01371 315 Pfam SWIB/MDM2 domain 239 309 IPR003121 -
Pste7g01371 315 Pfam SWIB/MDM2 domain 137 207 IPR003121 -
Pste7g01371 315 PANTHER SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY D 218 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g01371 Pste-Chr7 12406784 12410661 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SWI/SNF-BAF60b Pste7g01371 SWIB 4.8e-20 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g01371 7 12406784 12410661 Pste7g01371 7 12406784 12410661 ECH