Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g01225 ATGGACCCAGCTTCATTGTTCCGAGGGTGCGTATTGGAAGGAAGATGGGACTACGTAATGCCAGCATATAGAAATAGCAGTGAGTATCACAAAATAAAAATTAACGAAAGCAGAGGCACTGCACTACACGTGGCAGTGAATGATGGGAGAGTGGAACGTGTTAATTGGCTTGTTGGTGCAATCTTAAACCATGAAGGGTGGGAAGTGGTGAGGGATGATAGTGCACTGAAATCAAGGAATGAGAGAGGGGACACTCCTTTGCACCTTGCAGCCTCAAGAGGGTTCACTCAAATGTGTAAGTGCATTATTGGGGAGTATGGAGAAAGGAAGGAATTGATTAGGGTAAGGAACAATAAGGGTGAAACACCTCTCTTTCGAGCTGTTCTCACATGCCAAACCAAGACCTTTGTCTACCTCCATCATGTTTCCAAAGATTTAGATGTTTCACTTATCAACTATGATGGGGATACCATCCTTCACTATGCCATTTGGAGAGAATTCTTGGATTTGGCAATTATAATCACTCATTGCTATCCCCAACTTGTTGACACACGAAACAAAGATGGAGCCACTCCTCTCAAGGTTCTTGCATGTAAGCCTTCGGCCTTCAAGAGTGGAAGCAATCTCCCATGGTGGAAGCAAATTCTATATTAC 654 0.4373 MDPASLFRGCVLEGRWDYVMPAYRNSSEYHKIKINESRGTALHVAVNDGRVERVNWLVGAILNHEGWEVVRDDSALKSRNERGDTPLHLAASRGFTQMCKCIIGEYGERKELIRVRNNKGETPLFRAVLTCQTKTFVYLHHVSKDLDVSLINYDGDTILHYAIWREFLDLAIIITHCYPQLVDTRNKDGATPLKVLACKPSAFKSGSNLPWWKQILYY 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g01225 218 Pfam Ankyrin repeats (3 copies) 42 140 IPR002110 GO:0005515
Pste7g01225 218 SMART ANK_2a 82 111 IPR002110 GO:0005515
Pste7g01225 218 SMART ANK_2a 119 148 IPR002110 GO:0005515
Pste7g01225 218 SMART ANK_2a 154 183 IPR002110 GO:0005515
Pste7g01225 218 SMART ANK_2a 37 66 IPR002110 GO:0005515
Pste7g01225 218 Gene3D - 124 201 IPR036770 -
Pste7g01225 218 PANTHER NO MECHANORECEPTOR POTENTIAL C, ISOFORM D-RELATED 35 213 - -
Pste7g01225 218 SUPERFAMILY Ankyrin repeat 23 198 IPR036770 -
Pste7g01225 218 Gene3D - 20 123 IPR036770 -
Pste7g01225 218 FunFam Uncharacterized protein 4 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g01225 Pste-Chr7 11335319 11336573 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g01225 14 201 Miscellaneous Gene Families AT5G54610 25.888 3.78e-06 45.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g01225 7 11335319 11336573 Pste7g01225 7 11335319 11336573 ECH