Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00822 ATGAAGAGAGCAACTATCTCCTCTTATTTCCATTTTTTGCATTATCATTATCATAACCCGTTTCTGGGTTTTGGACCAAATTGTTTGAGTGTGAAAATTTTCTCTTCTTTGGGTGCAAGCAATGCCAGACCTTTTCCTGATTACTCCCCAAGAAAGCCTTCAGTCGCAGACACTGACTTTGTGCACCACATTTCCACCACCATTAAGCAGCGCCGTGCCGCCCCTTTTCGCCGGATTCTCAAGCCTTTTGAGTCAAAATTCAAGCCTGATCATCTCATTTGGGTTCTTATGAACATCAAGGATGACTATAAGCTTGTGTTGGATTTCTTCAACTGGGCACGCCTGCGTAGAGACCCTTCCTTGGAAGCCCTTTGCATTGTGGTTCAAATTGCTGTGGCTTCTAAGGATTTGAAAACGGCTCATAGGCTGATTTTTGAGTTCTGGGAAAAGCCACATTTGGATGCTGATAACTCGTTTGCACGGTTTACTGAGAGATTGATTTATACTTACAAGGACTGGGGTGCACACCCCCTTGTGTTTGATGTGTTCTTCCAAGTTCTTGTTGAGGCAGGGTTGCTTCTAGAAGCTGGGAAACTGTTTGATAAGTTGGTAAATTATGGTGTTCTTCTCTCTGTAGATTCTTGTAATTTGTTTCTAGCTAGGTTATCTAACAGTTTTTATGGGATAAAGACAGCGATTAGGGTGTTCAGAGAGTATCCTGAAGCGGGTGTTTGTTGGAACACCATGTCGTATAATATTATTCTTCATTCACTTTGTCAATTGGGTAAGGTAAAAGAAGCACATAATCTGCTCGTACAAATGGAGTTTAAGGGGAATGTTCCTGATGTTGTAAGTTATAGCGTTATAATTAATGGATACTGTCAGATCGAACAGCTAGGAAAGGTTTTGAAGCTCGTGGAAGAATTGCAGAGAAGGGGATTGAAACCGAATCAATACACATACAATAGTATAATTGCCCTTCTTTGCAAGACTGGTAGAGTAGTTGAAGCAGAGAAAGTCTTGAGGAAGATGATAGACCACCAGCGGGTTTTTCCTGATAATGTGGTGTATACAACTCTCATCAGTGGGTTCAGCAAGTCTGGGAACGTTTCAGCTGAATACAAACTCTTTGATGAAATGAGGTGTAAGAAAATAGTTCCTGATTTTGCCACATATACTTCCATGATTCATGGGCTCTGCCAAACTGCAAAGGTGGAGGAAGCACGCAAACTATTTAGTGAAATGTTCAATAAAGGGTTGGAACCAGATGAGGTTACATATACTGCTCTTATTGATGGATATTGCAAAGCTGGGGAAATGAAAGAGGCATTCTCTCTTCACAACCAGATGGTTGAGAAGGGTCTGACTCCTAATGTTGTCACTTATACTGCATTAGTTGATGGCTTGTGTAAACGTGGAGAGGTAGATATAGCAAATGAGCTCCTTCATGAAATGTCTGAAAAGGGCCTTCAACCAAATGTTTGCACGTATAATTCACTAATCAATGGTCTTTGTAAGATAGGAAATATAGAGCAAGCCGTAAAACTTATGGAAGAAATGGATCTGGCAGGGTTTTATCCTGACACTATTACATATACTACACTCATGGATGCTTATTGTAAGATGGGTAAAATGGTCAAGGCTCATAAATTGCTGCTGATTATGCTTGATAAAGGACTTCAACCTACAATTGTTACATTCAATGTTCTAATGAATGGGTTTTGCATGTCAGGGATGTTGGAAGATGGTGAAAGACTAATCAAATGGATGTTGGAAAAAGGTATAATGCCAAATGCCACAACATTCAATTCTCTTATGAAGCAATACTGTATTAGAAATAACATGCGAGCTACTACCGAGATTTATAAGGGGATGCATGCTCAAGGAGTGATACCTGACAATAATACCTATAATATTTTGATTAAAGGGCATTGTAAAGCTAGAAATATGAAAGAGGCATGGTTTTTGCATAAAGAAATGGTTGAAAAGGGATTTAGTCTAACTGCTGCTTCCTACAATGCTCTTATAAAGGGTTTCTATAAGAGGAAGAAATTTGTGGAGGCTAGGAAGCTATTTGAGGAGATGAGAACTCAAGGGTTCGTTGCAGAAAAAGAGATATATGATATTTTCGTTGATGTAAACTATGAAGAAGGGAACTGGGAAAATACTCTTGAGCTTTGTGATGAAGCAATAGAAAAATGTCTTGTTGAGAGAACTTAG 2220 0.3937 MKRATISSYFHFLHYHYHNPFLGFGPNCLSVKIFSSLGASNARPFPDYSPRKPSVADTDFVHHISTTIKQRRAAPFRRILKPFESKFKPDHLIWVLMNIKDDYKLVLDFFNWARLRRDPSLEALCIVVQIAVASKDLKTAHRLIFEFWEKPHLDADNSFARFTERLIYTYKDWGAHPLVFDVFFQVLVEAGLLLEAGKLFDKLVNYGVLLSVDSCNLFLARLSNSFYGIKTAIRVFREYPEAGVCWNTMSYNIILHSLCQLGKVKEAHNLLVQMEFKGNVPDVVSYSVIINGYCQIEQLGKVLKLVEELQRRGLKPNQYTYNSIIALLCKTGRVVEAEKVLRKMIDHQRVFPDNVVYTTLISGFSKSGNVSAEYKLFDEMRCKKIVPDFATYTSMIHGLCQTAKVEEARKLFSEMFNKGLEPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKRGEVDIANELLHEMSEKGLQPNVCTYNSLINGLCKIGNIEQAVKLMEEMDLAGFYPDTITYTTLMDAYCKMGKMVKAHKLLLIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLEKGIMPNATTFNSLMKQYCIRNNMRATTEIYKGMHAQGVIPDNNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNALIKGFYKRKKFVEARKLFEEMRTQGFVAEKEIYDIFVDVNYEEGNWENTLELCDEAIEKCLVERT 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00822 739 PANTHER MITOCHONDRIAL GROUP I INTRON SPLICING FACTOR CCM1 328 643 - -
Pste7g00822 739 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 458 492 IPR002885 -
Pste7g00822 739 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 388 422 IPR002885 -
Pste7g00822 739 Gene3D Tetratricopeptide repeat domain 349 446 IPR011990 GO:0005515
Pste7g00822 739 FunFam Pentatricopeptide repeat-containing protein At5g39710 442 547 - -
Pste7g00822 739 Gene3D Tetratricopeptide repeat domain 589 660 IPR011990 GO:0005515
Pste7g00822 739 Gene3D Tetratricopeptide repeat domain 523 588 IPR011990 GO:0005515
Pste7g00822 739 Gene3D Tetratricopeptide repeat domain 448 522 IPR011990 GO:0005515
Pste7g00822 739 Gene3D Tetratricopeptide repeat domain 661 733 IPR011990 GO:0005515
Pste7g00822 739 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 668 702 IPR002885 -
Pste7g00822 739 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 353 387 IPR002885 -
Pste7g00822 739 FunFam Pentatricopeptide repeat-containing protein At5g39710 335 441 - -
Pste7g00822 739 Pfam PPR repeat 312 344 IPR002885 -
Pste7g00822 739 SUPERFAMILY HCP-like 434 701 - -
Pste7g00822 739 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 423 457 IPR002885 -
Pste7g00822 739 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 528 562 IPR002885 -
Pste7g00822 739 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 282 316 IPR002885 -
Pste7g00822 739 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 598 632 IPR002885 -
Pste7g00822 739 NCBIfam pentatricopeptide repeat 250 283 IPR002885 -
Pste7g00822 739 NCBIfam pentatricopeptide repeat 565 599 IPR002885 -
Pste7g00822 739 NCBIfam pentatricopeptide repeat 460 494 IPR002885 -
Pste7g00822 739 NCBIfam pentatricopeptide repeat 601 633 IPR002885 -
Pste7g00822 739 NCBIfam pentatricopeptide repeat 319 353 IPR002885 -
Pste7g00822 739 NCBIfam pentatricopeptide repeat 284 317 IPR002885 -
Pste7g00822 739 NCBIfam pentatricopeptide repeat 671 701 IPR002885 -
Pste7g00822 739 NCBIfam pentatricopeptide repeat 355 388 IPR002885 -
Pste7g00822 739 NCBIfam pentatricopeptide repeat 425 459 IPR002885 -
Pste7g00822 739 NCBIfam pentatricopeptide repeat 530 563 IPR002885 -
Pste7g00822 739 NCBIfam pentatricopeptide repeat 391 424 IPR002885 -
Pste7g00822 739 NCBIfam pentatricopeptide repeat 636 668 IPR002885 -
Pste7g00822 739 NCBIfam pentatricopeptide repeat 495 529 IPR002885 -
Pste7g00822 739 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 633 667 IPR002885 -
Pste7g00822 739 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 493 527 IPR002885 -
Pste7g00822 739 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 247 281 IPR002885 -
Pste7g00822 739 Gene3D Tetratricopeptide repeat domain 180 348 IPR011990 GO:0005515
Pste7g00822 739 Pfam PPR repeat family 632 672 IPR002885 -
Pste7g00822 739 Pfam PPR repeat family 423 471 IPR002885 -
Pste7g00822 739 Pfam PPR repeat family 492 541 IPR002885 -
Pste7g00822 739 Pfam PPR repeat family 562 610 IPR002885 -
Pste7g00822 739 Pfam PPR repeat family 247 295 IPR002885 -
Pste7g00822 739 Pfam PPR repeat family 352 401 IPR002885 -
Pste7g00822 739 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 563 597 IPR002885 -
Pste7g00822 739 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 317 347 IPR002885 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00822 1 737 Glycosyltransferase AT1G05670 60.651 0.0 939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g00822 7 7657477 7659696 Pste7g00822 7 7657477 7659696 ECH