Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00771 ATGAACCAATCTCAACTTATCACGTTAGCTTTTGCCATCTCTTTTTCTCTCGCAAACGTCGTCGTTTCAGCTCGACTCTTTCCAAACATTTCCTCTTTCCTCCCCGAACCCGCCCACGGCCACGCGCAAGCCTACGCGCAGGCGCACGCGTGGGACGCGTTTCTCAACTTCGCCGGCTGCCACCGCGGTGACAGCTACGACGGTCTCAAGAACTTGAAGTCTTACTTTCAGCGATTCGGTTATATTCCTCACGCGCCGCCGTCGAACTTCTCCGACGAGTTCGACGACGCGCTCGAATCGGCAATCAAAGCGTATCAGAAGAATTTCAACCTAAACGTCAGCGGCGTCCTCGACGCCGCGACGCTGCAGCAGATCGTGCTGCCGCGGTGCGGCAACGCGGACATAATAAACGGCACGACGACGATGAAGAAGGAGAACGAAACGGCGTCGTTCACGAAACCGAGGTTCCACACGGTGGCGCACTACACTCTCTTCCCCGGCATGCCGCGGTGGCCGGAGGGAACGGAGGAGCTGACGTACGCGTTTTTCCCCGGGAACGACCTCAGCGAGTCGGTGAGAGCCGTTTTCGCCGCCGCGTTCGCGCGCTGGGCGGAGGTGACGAGGCTGACGTTCCGCGAAACGGCGTCGTACTTCGGCGCCGACATCAGGATCGGATTCTTCAGCGGCGACCACGGCGACGGCGAGCCGTTCGACGGGAGTTTGGGGACGCTGGCGCACGCGTTCTCGCCGACGAATGGGAGGTTCCACCTGGACGCCGCCGAGGACTGGGTGGTTTCTGGCGACGTGACGCGGTCGGCGCTAGCCACGGCGGTGGATTTGGAGTCCGTGGCGGTGCACGAGATTGGACACTTGTTAGGGTTAGGGCACTCTTCCGTTGAAGAAGCGGTTATGTTTCCGACTATTTCATCGCGGAAGAAGAAAGTGGTGCTCGCCAAAGACGATGTCGAAGGGATTCAATTCCTCTACGGTTCCAATCCCAATTACAATGGCTCCACTGCCACGTCAGCACCGGAGAGAGACGCCAGCAACGGTGGTATTTGCGTCACTTGTGTGGGTCCCTCTCGGAGCGTTTTTACACTGTTGACTTTTGCATTTGCACATTTTGCGTTGTTATAG 1137 0.5831 MNQSQLITLAFAISFSLANVVVSARLFPNISSFLPEPAHGHAQAYAQAHAWDAFLNFAGCHRGDSYDGLKNLKSYFQRFGYIPHAPPSNFSDEFDDALESAIKAYQKNFNLNVSGVLDAATLQQIVLPRCGNADIINGTTTMKKENETASFTKPRFHTVAHYTLFPGMPRWPEGTEELTYAFFPGNDLSESVRAVFAAAFARWAEVTRLTFRETASYFGADIRIGFFSGDHGDGEPFDGSLGTLAHAFSPTNGRFHLDAAEDWVVSGDVTRSALATAVDLESVAVHEIGHLLGLGHSSVEEAVMFPTISSRKKKVVLAKDDVEGIQFLYGSNPNYNGSTATSAPERDASNGGICVTCVGPSRSVFTLLTFAFAHFALL 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00771 378 Pfam Putative peptidoglycan binding domain 68 124 IPR002477 -
Pste7g00771 378 SUPERFAMILY PGBD-like 72 135 IPR036365 -
Pste7g00771 378 FunFam Metalloendoproteinase 1 59 335 - -
Pste7g00771 378 Gene3D Collagenase (Catalytic Domain) 57 336 IPR024079 GO:0008237
Pste7g00771 378 PRINTS Matrixin signature 220 248 IPR021190 GO:0004222|GO:0006508|GO:0008270
Pste7g00771 378 PRINTS Matrixin signature 196 211 IPR021190 GO:0004222|GO:0006508|GO:0008270
Pste7g00771 378 PRINTS Matrixin signature 283 308 IPR021190 GO:0004222|GO:0006508|GO:0008270
Pste7g00771 378 PRINTS Matrixin signature 317 330 IPR021190 GO:0004222|GO:0006508|GO:0008270
Pste7g00771 378 PRINTS Matrixin signature 125 138 IPR021190 GO:0004222|GO:0006508|GO:0008270
Pste7g00771 378 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 165 334 - -
Pste7g00771 378 PANTHER MATRIX METALLOPROTEINASE 47 343 - -
Pste7g00771 378 CDD ZnMc_MMP 203 330 IPR033739 GO:0008237|GO:0008270
Pste7g00771 378 SMART col_5 167 331 IPR006026 GO:0006508|GO:0008237|GO:0008270
Pste7g00771 378 Pfam Matrixin 175 330 IPR001818 GO:0004222|GO:0006508|GO:0008270|GO:0031012
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00771 Pste-Chr7 7014008 7015144 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g00771 7 7014008 7015144 Pste7g00771 7 7014008 7015144 ECH