Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00762 GAAGCCTGGCTGAGGCTCCAACTGTTGTTTGTGTCAGGAACCTGACCAAAATAAAAGCAAAAGCCATGGCCACGAGGCCTGAGAGTGAAAAAGACCTTCCACAACCACCTTCACGTGGCTTTGTGGACACAGTGCAAGAAATCACCAGAATCTATAGGTCTCTGCCACCTAGACCTTCTATTCAAGAAGTGGAAGCTGCCACGTCCACTGTGGATACCCTCAACAACGAGGAACAAACCAAACTCCACCAAATTTCAATGCAACAACCTCCCCACGATGTCCCCGATGACCTCTTCTCTGTCCTGCAACAACTCAAGAAAACCATGGTCCTCTTCCACACCCATCAACAGAGGAAAGAGGCACTTCATCTTCTTCAGCTTGAAGAGATGTTTCAAACCTTCGGCGAACTCATTCAGAGGGCTTCTGAATTGGTTTCTGGAGATACCCAGAAGCATAGCCTTCCCACTATACCTGAAGAACACGTTTTGATCACTGATGGAACTTTGGTGAAGGAAGAGGAAGAACCACACAATAATGATTTCCATGTGCCGGAACCTTCCTTCTCTGCAGCTACAACCCTTGAGCTTAGAGGGAAATTGGTAGATCAGATGGAATGGTTGCCGATATCAATTGGGAAATTATCTGATGTCACTGAAATGGACCTATCTGAAAACAGAATCATGGCTCTTCCAACAACCATTGTGGGTCTCAAGGCCTTAACAAAGCTTGATCTTCACTCAAACCAACTTATAAACCTTCCCCACTCGTTTGGTGAATTGATAAACCTTGTTGATCTTGACCTTCACGCCAACAGATTGAGATCACTTCCTGCTACTTTTGGAACCTTGACAAATCTCATTGATCTAGACTTGAGTTCAAATGGGTTCACGGGTTTACCAGAGACAATTGGGAATTTGAGTAGCTTGAGGAGATTAAATGTTGAGACCAATGAGCTTGAAGAACTGCCTCACACAATTGGAAATTGCTCATCTCTATCTGTGCTGAATTTAGATTTCAATCAGCTCAAGGCCCTTCCTGAGGCAATTGGGAAGCTTGAAAGGTTGGAGACTCTAACTTTGCACTATAATAGAGTTAAGAGATTGCCTTCCACAGTGGGTAATCTATGCAATTTGAAGGAACTTGATGTCAGCTTTAACGAGATCGAATTTATACCAGAGAACCTGTGTTTTGCAACTAATTTGAAGAAATTAAACTTGGGAAAGAACTTTGCGGACCTAAGGGCCTTGCCGACATCTATTGGAAATCTTGAAATGCTTGAGGAGTTGGATATAAGCGATGATCAAATAAAAGCTCTGCCAGAGTCTGTCAGGTTCTTGTCCAAGTTGAGAGTTTTTCGGGCTGATGAGACCCCCCTTGAGGTGCCACCGAGAGAATTCGTCAAGTTGGGTGCGCAGGAAGTTGTGCAGTATATGGCTGATTTTGTCACCAAGAGGGATGCAAGACTTGTGCCATCAAAGAAGAAAAAGAAGGGATTTTGGTTCTGGTTTTGCTCCATATTTTGCCCTCAGCTGAAATGATGCTTCGACAAAATCTGTGTTAATTTGTGTTTCTTGTGTTTATATTATCTTTGTACAATGCATATATTCGGAACACCTTATTTTTTATAATAAAATGATGGGTTTGCCTTGTATATAATTTTGATTTTGTGTAACTATAATGGAAGATAGTGTAATACAGCACCATAGGTAGTTTTACCGAGTAAATTGCTAACATTTTTAAAAATAATTTAGTGCAATTATAC 1762 0.4183 MATRPESEKDLPQPPSRGFVDTVQEITRIYRSLPPRPSIQEVEAATSTVDTLNNEEQTKLHQISMQQPPHDVPDDLFSVLQQLKKTMVLFHTHQQRKEALHLLQLEEMFQTFGELIQRASELVSGDTQKHSLPTIPEEHVLITDGTLVKEEEEPHNNDFHVPEPSFSAATTLELRGKLVDQMEWLPISIGKLSDVTEMDLSENRIMALPTTIVGLKALTKLDLHSNQLINLPHSFGELINLVDLDLHANRLRSLPATFGTLTNLIDLDLSSNGFTGLPETIGNLSSLRRLNVETNELEELPHTIGNCSSLSVLNLDFNQLKALPEAIGKLERLETLTLHYNRVKRLPSTVGNLCNLKELDVSFNEIEFIPENLCFATNLKKLNLGKNFADLRALPTSIGNLEMLEELDISDDQIKALPESVRFLSKLRVFRADETPLEVPPREFVKLGAQEVVQYMADFVTKRDARLVPSKKKKKGFWFWFCSIFCPQLK 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00762 490 ProSiteProfiles Leucine-rich repeat profile. 355 376 IPR001611 GO:0005515
Pste7g00762 490 SMART LRR_typ_2 401 424 IPR003591 -
Pste7g00762 490 SMART LRR_typ_2 284 307 IPR003591 -
Pste7g00762 490 SMART LRR_typ_2 215 237 IPR003591 -
Pste7g00762 490 SMART LRR_typ_2 308 329 IPR003591 -
Pste7g00762 490 SMART LRR_typ_2 238 260 IPR003591 -
Pste7g00762 490 SMART LRR_typ_2 330 352 IPR003591 -
Pste7g00762 490 SMART LRR_typ_2 192 214 IPR003591 -
Pste7g00762 490 SMART LRR_typ_2 353 376 IPR003591 -
Pste7g00762 490 SMART LRR_typ_2 261 283 IPR003591 -
Pste7g00762 490 SUPERFAMILY L domain-like 166 439 - -
Pste7g00762 490 PANTHER - 150 387 - -
Pste7g00762 490 SMART LRR_bac_2 307 326 - -
Pste7g00762 490 SMART LRR_bac_2 284 303 - -
Pste7g00762 490 SMART LRR_bac_2 353 372 - -
Pste7g00762 490 SMART LRR_bac_2 401 420 - -
Pste7g00762 490 SMART LRR_bac_2 215 234 - -
Pste7g00762 490 SMART LRR_bac_2 261 280 - -
Pste7g00762 490 SMART LRR_bac_2 330 349 - -
Pste7g00762 490 FunFam Plant intracellular Ras-group-related LRR protein 4 161 459 - -
Pste7g00762 490 Gene3D Ribonuclease Inhibitor 156 463 IPR032675 -
Pste7g00762 490 Pfam Leucine rich repeat 240 297 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00762 Pste-Chr7 6955561 6958102 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00762 188 416 Receptor kinase-like Gene Family AT3G11080 33.755 9.36e-24 103
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g00762 7 6955561 6958102 Pste7g00762 7 6955561 6958102 ECH