Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00678 TGATAACAAACACGAGACTAGTTCTAAAAGAAAAGCCGACTCAACGCGAAGAAGGAAAGGAAAAGAGAAAGAATGAGCGAGCAGAATAAGGTGTCTCTCTTGGACTGATTCGCATCTCTACCTCTACTACTGCTCTTCAATCTCCACAACATACTTTTTTCATTTCTTCATTTCTTCATGGCCGTTCAAGCTCAATATCCATCCAATGTCCTTCTTCAAACCAGGCCCAAGCAAGAAGAACAGGACTACTTATTGGAAACGCAACAGGGAGCACCACTCTTAAACAAGTCTCCCATGTTATACAACAACAATGGAAATGGAAATAACAATTCTAGGAAGCGAGAAAGAGAAGAAACAGTCCTCGGAAACGCAATCACAGGCATCAATCCTTTCTTTCTACAATCTCAGCAGCCTCCGCAACTCATTCACCTCTCTCAGCTCCACAATCAACAACATAATGCCGTCTCCACCGGCCTCCGCTTATCCTTGGACGACCAACAACAAAGGCTACAACATAATCATCAATCTCAACAACATCTCTCCCCCTCTTCTGCTTTCTTATCTCTATTGTCACAACATGGTTTCGCTTCTCTAATCAAACAACAGCGTGATGAACTTGATCAATTGCTCCAAGCCCAGGGAGAGCAACTGAGGCGGGCATTGGCTGAGAAGAGGCAGAGGGACAACCGGGCGCTGCTGCTCGCCGCGGAGGAGGCGGTGGCGCGTCGCCTGAGAGAGAAAGAGGCAGAAGTGGAGAAAGCAAGGCGCAAAAACGCGGAGTTGGAAGCGCGCGCGGCCCAGCTGAGCGTGGAGGCGCAGGCGTGGATGGCCCGGGCCCGGACCCACGAAGTCACCGCGGCCTCCCTCCAGGCCCAACTGCAGCAGACCATAATGTGTCACGGCCGAGAAGACGCGGCAGTGGCGTGCGCCTTGGAGAACCAGGCGGACGACGCCGAGTCGGCCCACATCGACCCCGAGCGCGTTGAGCCTGTGGCGGCGCGTCCCAATTGCAGAGGGTGCGGGCAGCGCGTGGCCTCGGTCTTGCTTTTGCCTTGTCGGCACTTGTGCATCTGTGCAGAATGCGTTACGCATTTCCCAGCGTGCCCAGTTTGTCTCACCCCCAAGAATTCAACCATTCAAGTTTCTTTCTCCTAACAACCCTCTCTCTCTCTCTCTCAATTTTCTCAATTATTACCCTCCTCCTTCCTTGTCCATACCAAGCACCACACCCAACACGCCCGCCCCAAAGGAAATTTTCTCATCAAACAAAATATAAATAAAATTACATTTTTTTCCCCTCTCTTTTCAACTCACATGATATATGATATTACCAAGGTGAACTTTCATTTCAGTACAGTTAAATTAAGTTACCTTCCTCGTGATGTACATGGCCACGTGGCTACCAGTGCCATTTTTCTTTTTCTTTTCCTCAAAAACTTCTTCTATTGCAT 1451 0.4948 MAVQAQYPSNVLLQTRPKQEEQDYLLETQQGAPLLNKSPMLYNNNGNGNNNSRKREREETVLGNAITGINPFFLQSQQPPQLIHLSQLHNQQHNAVSTGLRLSLDDQQQRLQHNHQSQQHLSPSSAFLSLLSQHGFASLIKQQRDELDQLLQAQGEQLRRALAEKRQRDNRALLLAAEEAVARRLREKEAEVEKARRKNAELEARAAQLSVEAQAWMARARTHEVTAASLQAQLQQTIMCHGREDAAVACALENQADDAESAHIDPERVEPVAARPNCRGCGQRVASVLLLPCRHLCICAECVTHFPACPVCLTPKNSTIQVSFS 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00678 325 MobiDBLite consensus disorder prediction 35 50 - -
Pste7g00678 325 MobiDBLite consensus disorder prediction 35 56 - -
Pste7g00678 325 Coils Coil 175 219 - -
Pste7g00678 325 ProSiteProfiles Zinc finger RING-type profile. 278 312 IPR001841 -
Pste7g00678 325 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 43 322 IPR017066 -
Pste7g00678 325 CDD mRING-HC-C3HC5_CGRF1-like 278 312 - -
Pste7g00678 325 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 253 324 IPR013083 -
Pste7g00678 325 Pfam Zinc finger, C3HC4 type (RING finger) 277 317 - -
Pste7g00678 325 PIRSF SBP1_RNase_bind 1 325 IPR017066 -
Pste7g00678 325 Coils Coil 144 164 - -
Pste7g00678 325 FunFam probable BOI-related E3 ubiquitin-protein ligase 2 258 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00678 Pste-Chr7 6193360 6195111 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00678 278 314 Miscellaneous Gene Families AT2G21380 40.541 4.73e-06 46.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g00678 7 6193360 6195111 Pste7g00678 7 6193360 6195111 ECH