Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00643 ATGTTCAGTGCAAATTGTGAATGTAGGGATCCATTGGCTGAAGGAGAAATGGGGTTGACATTCACCAAGCTTTTCAGTCGGCTTTTTGCCAAGAAGGAAATGCGAATTCTGATGGTTGGTCTTGATGCAGCTGGTAAGACAACCATCTTGTACAAGCTCAAACTTGGAGAGATCGTTACCACAATTCCCACCATTGGGTTCAATGTGGAGACTGTTGAATACAAGAATATTAGCTTCACTGTCTGGGATGTTGGTGGCCAGGACAAGATTCGTCCCTTGTGGAGGCATTACTTCCAAAACACACAGGGTCTTATCTTTGTGGTTGACAGCAATGACAGGGACAGAGTTGTTGAGGCCAGAGATGAGTTGCACAGGATGTTGAATGAGGATGAACTGAGAGATGCAGTATTGCTTGTATTTGCTAACAAACAAGATCTTCCGAATGCAATGAATGCTGCTGAAATTACTGACAAGCTGGGTCTCCACTCTCTCAGACAGCGCCACTGGTACATCCAAAGCACCTGTGCAACCTCAGGGGAGGGTCTTTATGAGGGTTTGGACTGGCTTTCCAACAACATAGCCAACAAGGCTTAATCCTTTTTGGGAGTCCTTTTGTGGATTGGTAATTCTGGATGCAGGGGTGAATATTATCTAGTTTGTTTTTTGGTTCTTTTCTGGGACACATTGGCTTTTTATGTTCATGTTTTCTTGTTTAGGACATCTTGATGGCTAAAATTATAGTAGGAATTTGTTTTCATGGGATGTCTAATACTTTTGAGCTTCTTATTGGGTTTGGATTCAATGTTTATATCTGTAATTGATACCAATCAATGCGTCATCCCATATTGAGTTTTTATGCTTTTATTTTGTTAATACTCCTCTCATGATTATTATTGCGTTACCCAACAATCATGAGAAAACTTCTCATCACTCAGCTAAATCTTCAAATATTTGTATTGCTCGAACATTGCTCTAAACGCTTCCTTCGATGCTACAGTGGAGCATCAACTTGC 1013 0.4097 MFSANCECRDPLAEGEMGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00643 197 SMART rab_sub_5 34 196 - -
Pste7g00643 197 SMART arf_sub_2 17 197 - -
Pste7g00643 197 SMART sar_sub_1 17 193 IPR006689 GO:0003924|GO:0005525
Pste7g00643 197 FunFam ADP-ribosylation factor 1 17 197 - -
Pste7g00643 197 CDD Arf1_5_like 34 192 IPR045872 GO:0003924
Pste7g00643 197 Pfam ADP-ribosylation factor family 21 193 IPR006689 GO:0003924|GO:0005525
Pste7g00643 197 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 30 195 IPR027417 -
Pste7g00643 197 PANTHER ADP RIBOSYLATION FACTOR-RELATED 17 192 IPR024156 GO:0005525
Pste7g00643 197 ProSiteProfiles small GTPase Arf family profile. 27 193 - -
Pste7g00643 197 Gene3D - 20 197 IPR027417 -
Pste7g00643 197 PRINTS GTP-binding SAR1 protein signature 90 115 IPR006689 GO:0003924|GO:0005525
Pste7g00643 197 PRINTS GTP-binding SAR1 protein signature 63 87 IPR006689 GO:0003924|GO:0005525
Pste7g00643 197 PRINTS GTP-binding SAR1 protein signature 35 58 IPR006689 GO:0003924|GO:0005525
Pste7g00643 197 PRINTS GTP-binding SAR1 protein signature 135 156 IPR006689 GO:0003924|GO:0005525
Pste7g00643 197 NCBIfam small GTP-binding protein domain 32 173 IPR005225 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00643 Pste-Chr7 5930512 5933927 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g00643 7 5930512 5933927 Pste7g00643 7 5930512 5933927 ECH
Pste1g00830 1 2568426 2573633 Pste7g00643 7 5930512 5933927 PCT