Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00571 ACTGCACTCAACCATCCTCAGAACCCCTCTTCTCAGCCAACCTCCAAATTCTATCATCAACCCAACCCAATCCAATCCAATCCTCTTCTTCCACAGTTTCAACGCAAAATCAACCAAAAGCACGTTTCTGAAAACCCTCTCGATGCCCCCAGACCCATGAATCATAAAATGGAGGCAATGGCCGAAAACCCAGGTAGGTCAAGAGGGTTAAAATACCCATCCAAAAGCCCTAACAAACCGCAAGCAACTCCCCCAATTCCCAAACCCAACCAATTCCCTTCCCACCTCGACGCGCCCAACGTCTCGCCCACCGCGCGTGCCCTATGCGACATCCTCACCCGCTCCTCCCCTCAGGACATCGAATCCTCGCTCTCTTCCTCGAGAATTGATCCCGAGGAAGAGTGCGTGAACGAGGTCCTCAGACTCTCGTACAATTACCCCTCCTCGGCCGTCAAGTTCTTTCGATGGGCCGGGCGCGGAAAAAAGCACCCGACCCATACGTGGAACTTGATGGTCGACCTACTGGGTAAAAACCAGCTCTTTGAGCCCATGTGGGACGCTGTCAGGTCTATGAAACAGGAAGAGAAGCTTTCTCTCTCCACTTTCGCTTCCATTTTCCAAAGCTACTGCACCGCCGGTAGATTTAACGAGGCCGTTATGAGCTTCGACGTGATGGACAGGTACGGCGTCAAGCAGGACGTGGTCGCCGTTAACTCGCTCCTCAGCGCTATTTGCAGCGAGGACAACCAAACCTCCGCTGGCCTCGAATTCTTCGAGGGGATTAAGGGGAAGGTGCCGCCTGACGGTGACACCTTCGCCATTCTCCTCGAAGGGTGGGAGAAGGAATGCAATGCTGCCAAAGCTAAGACCACGTTTGGGGAGATGGTCGTCCGTGTTGGCTGGAACAAGGACAATGTTGCCGCCTATGATGCTTTTTTGATGACACTCCTTCGTGCTGGCCTCGTGGATGATGTTGTGAGGTTCCTTCAAGTTATGAAGGACCATGAGTGTTTTCCAGGGTTGAAATTCTTTACCAATGCGCTTGACTTTCTTGTCAAGCTAAACGACGCTGATCACGCCCTCCCCACTTGGGATGTGATGGTGAGTGGTGGCTTGATGCCTAATTTGATCATGTACAACGCCATGATTGGCCTGCTATGCAACAATGCTGTGATTGACCATGCTTTTCGCCTGCTCGATGAGATGGTCTTCCATGGCGCTTTCCCAGATGCCTTGACTTACAACATGATCTTCGAGTGCTTGGTGAAGAACAAGAAGGTTCGCGAGACTGAGAGCTTTTTCGCCGAGATGATCAAGAACGAGCGGCCGCCCACCGCCTCCAATTGTGCTGCAGCCATTGCAATGCTGTTCGACTGTGATGACCCTGAAGCTGCACATGAAATTTGGAGTTATGTTGTTGACAATTGTATCAAGCCACTTGATGAATGTGCGAATGAGTTGGTTGTTGGGCTTTGTAAATTGAGTAGATTCACGGAGCTGAAAAGGGTTGCTGAGGACCTTCTCGATAGAAGGATCCATATATATGAATCTACAATGAGCATACTGAAGGATGCCTTCTATAAAGAAGGCAGAAGTGCAAGAGACAGATATGATAGTCTTTATAGGAGATGGAAAGCCCATGAGGCTAGTGACACTGAAAATTGGGATGAACTTTCTAGTTATGACTGTTATTCTGGCAATGTTTCTCCAAGTTTTGGTTCACATTGTGGTACAGGCAGTTCTTTTTGTCCATTTTCATTTAAATCATGTATCTTTGAACAAAGTCTCAAATTGAGCTTTCTTGTTCTGTGTTTCTACATGGTAATTTTATTGTTTATGTGTAGGGATGACCAAATTTCTTTGAGGTGTATACCATTAGAGTCCCTGTGGATTACAGCAATGAAGTCTGGAATACATAGGAACGCAGGGAAGTTAGTGGATTTTAGATCAGATTTCCGGTGGCAGAGTCCAGGTCTCTTGAATACTGGGTTTATATTTTCTGTTATTCAACAATTTGTCTTGTCCATT 2028 0.4778 TALNHPQNPSSQPTSKFYHQPNPIQSNPLLPQFQRKINQKHVSENPLDAPRPMNHKMEAMAENPGRSRGLKYPSKSPNKPQATPPIPKPNQFPSHLDAPNVSPTARALCDILTRSSPQDIESSLSSSRIDPEEECVNEVLRLSYNYPSSAVKFFRWAGRGKKHPTHTWNLMVDLLGKNQLFEPMWDAVRSMKQEEKLSLSTFASIFQSYCTAGRFNEAVMSFDVMDRYGVKQDVVAVNSLLSAICSEDNQTSAGLEFFEGIKGKVPPDGDTFAILLEGWEKECNAAKAKTTFGEMVVRVGWNKDNVAAYDAFLMTLLRAGLVDDVVRFLQVMKDHECFPGLKFFTNALDFLVKLNDADHALPTWDVMVSGGLMPNLIMYNAMIGLLCNNAVIDHAFRLLDEMVFHGAFPDALTYNMIFECLVKNKKVRETESFFAEMIKNERPPTASNCAAAIAMLFDCDDPEAAHEIWSYVVDNCIKPLDECANELVVGLCKLSRFTELKRVAEDLLDRRIHIYESTMSILKDAFYKEGRSARDRYDSLYRRWKAHEASDTENWDELSSYDCYSGNVSPSFGSHCGTGSSFCPFSFKSCIFEQSLKLSFLVLCFYMVILLFMCRDDQISLRCIPLESLWITAMKSGIHRNAGKLVDFRSDFRWQSPGLLNTGFIFSVIQQFVLSI 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00571 676 Gene3D Tetratricopeptide repeat domain 342 570 IPR011990 GO:0005515
Pste7g00571 676 Gene3D Tetratricopeptide repeat domain 121 303 IPR011990 GO:0005515
Pste7g00571 676 NCBIfam pentatricopeptide repeat 377 411 IPR002885 -
Pste7g00571 676 NCBIfam pentatricopeptide repeat 413 445 IPR002885 -
Pste7g00571 676 PANTHER OS03G0856100 PROTEIN 52 402 - -
Pste7g00571 676 MobiDBLite consensus disorder prediction 1 100 - -
Pste7g00571 676 Pfam PPR repeat 201 230 IPR002885 -
Pste7g00571 676 Pfam PPR repeat family 374 423 IPR002885 -
Pste7g00571 676 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 198 232 IPR002885 -
Pste7g00571 676 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 375 409 IPR002885 -
Pste7g00571 676 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 410 444 IPR002885 -
Pste7g00571 676 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 305 339 IPR002885 -
Pste7g00571 676 MobiDBLite consensus disorder prediction 1 40 - -
Pste7g00571 676 MobiDBLite consensus disorder prediction 78 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00571 Pste-Chr7 5265331 5268475 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00571 270 571 Glycosyltransferase AT1G05670 23.355 1.18e-17 85.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g00571 7 5265331 5268475 Pste7g00571 7 5265331 5268475 ECH