Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00535 ATGTTGGTGAGAGAAAAAAGGCCCATATTTGAACCCACTTTGTCCGAGCCTGGCGGTGTGGCCTGGCGCAGCCGATTTTGCTGCGTCTCCGCTCTCTTCCCCCAAACCTCCCCCTATCTTCACGCCCCCCTCACCTGGGTGACCTCCACCGCCCTCCGCCCCCAGCGCCGCCACCACCTCCCTCCCCAGCCCCCGCCCTCTCCGCCGCCCCCTCTCCGCCTCTCATGCCATCCTCACCAGCCCGTTCTAGACTCTTCCAAATGCAATTCCATTCTCCCCAATTTATCACCTCACGAATTCGACCGCTTATTCCTCCCCCTCCACCACCTCGTTAACCCTAAAACCACTTCCCAATTCTTCCGTTTCGCCTCTCGCCGCTACAACTTCCGCTTCACCCTCCGCTCCTACTGCCTCCTCCTCCGCTCCCTCCTCTCCTCCCGTTTCCTCCCACGCGCCCGCTTCCTCCTCACGCGCCTCATCGACGGCCTCCTCCCCACGCCCTTTCCCCACCGCGAAACCAGGCTCCTCCAACTCGCTTCCTCCCTCCTCCACCTCACTCTCTCTTCCCCCAAACCCCTCGGCGAATTGGACCTACTTCTCCACATCCTCTGCTCCGACTCCAATTCCGGCTTTCGCTACGCTTTTGACATCTTCATCATGTTCTCCAAACGCTCCCTTTTCCCCTCCTTGAAAACCTGCAATTTTTTGCTCTGTTCCTTGGTCAAGGCCAACGAGCTTCACAAAAGCTATCAAGTGTTTGATCTTACTTGCCAAGCCGCTTCTCCTGATGTTTTCACGTTCACCACCGCGATTAACGCGTTTTGCAAGGGCGGCAGGGTGGCTGATGCCGTGGATTTGTTCTGCAGGATAGAGGGGTTCGGCGTTTCTCCCAATGTGGTTACTTATAACAGTGTCATTCATGGGTTGTGCAAGAGTGGGAGGTTGGATGAGGCGTTTAGGTTTAAGGAGAGGATGATTAGGAGCAAGGTGAATCCCAGTGTTGTGACTTATGGTGTCCTTATTAATGGTTTGGTGAAGTTGGAGAGGTTTGAGGAGGTGAATCAAGTGTTGGTGGAAATGTATGGTAAGGGTATTGCTCCCAATGAGGTTGTTTATAACGCGTTGATTGATGGGTATTGCAGGAAGGGGTATATGCTTGAGGCATTGAGGGTTCGCGATGAGATGTCATTCAAGGGAATGAAGCCTAATTTTGTTACTTTTAATACTCTTTTACAGGGCTTTTGCAGGAGCAATCAAATGGAGCAGGCTCAGCAGGTGTTGGGGTACTTATTGTCAAGTGGGTTGTCTGTGAACATGGATGCGTGTTCTTATGTGATTCATCGGTTATTGGAAAAGTCTTGCTTTGATTCAGCTTTGGAAATTGTTAAAAAGTTGTTGTCGAGGAACATCAAGGCTAGTGATAGCTTGCTAACCACGTTGGTCTGTGGACTTTGTAAATGTGAAAAACAATCGGATGCAATTGAACTTTGGTTTAAGCTGGCAGGTAAAGGGCTTGCAGCGAATACAGTGACATCGAATGCGCTTCTCCATGGGCTATGTGAACGAGGGGACATGGAGGAGGTTTTTGAGGTACTCAAACAAATGGTTGAGAAAGGTTTGTTGCTTGATGGGATCTCGTATAACACACTTATTTTTGGCTGTTGTAAATGGGGTAAACTTGAGGAAGCTTTCAAACTCAAAAAAGAGATGGTTCAGCAAGAATTCCAACCGGATACATATACGTACAATTTCCTAATGAAAGGGTTGGCTGATGTGGGTAAAATAGATGATGTTCATAGGCTTTTGCATGAAGCTGAACAATATGGCGTGGTTCCTAATGTCTATACGTATGCACTTTTATTAGAAGGATATTCTAAGGCTGATCAGATTGAAGAAGCCGAGAAATTGTTTAACAAGTTAGTATATGAGAAAGTAGAGCTAAGTGCTGTTGTTTATAACATACTTATTGCAGCCCACTGTAGAGTTGGGAATGTGATGGAAGCCTTCAAACTGCGTGATGCTATGAAAAGTCGGGACATTCTACCTACCTGTGCTACATATTCTTCTCTAATACATGGAATGTGCTGTATTGGCCGTGTAGATGAAGCAAAGGAAATTTTTGAAGAAATGAAAAATGAAGGCTTGTTTCCGAATATTTTTTCTTATACTGCTCTAATTGGTGGTTACTGCAAGTTAGGTCTAATGGACAATGTGAAGAGTATCTTACTGGAAATGTCCTCAAACAGTATACAACCTAACAAAATTACCTACACTATTATGATTGATGGGTACTGTAAATTGGGAAATGTGAAAGAAGCTACAGAACTTTTAAATGAGATGATAAAAAATGGAATAACTCCAGATACCGTCACTTATAATATATTGCAAAAAGGATATTGCAAGGAAAGAGAGCTAGAAGTTACTTTACAAAGTGATCATATGTCCAACGCAGGACTACCCTTAGAAGAAGAGATTACTTATAACACATTGGTTCACAGGTTGCATCCGCATACAGAACTGTTTCAAACGAGGGACAATTTCATGAGCTTAATTGGATTCTTGATTTTTGTTGGTTCTCTAGACTATAGGTATCCTGCTTTTTCAGTTTTGGAGGATACCATATCCTCCTTCAGAAGATGTGTTGCAAAGCAGGGTTTAGTTGCTGCTTGACCATGTTGCAAGCTTATTGTTGATGTTTATTTGATGATCCACGAAGGCAGTTGCCAACTTACACAGCATTAAGGATTTGAAGAAAAAACTTCCAGTGGATCTTCGATAGGAAACATGGTACACTGATGAGTTCCTTAGCACAGCAAAGAAGAGGATCACTTTTCAGATATAATGCAATGGCTAAAGCAGAATAAAGCAAAAATTTCAATCTGTGAAATGGGATGCATCTACACAGAAGGATTTTTGCGGTACAATATAGGGAAGGAGTGGAACATTGTTTAGAAAAGACTACAGGAATATAATGCATTGACTGTTTGAATTGTATACAAGACAAGTGAGCACATCCTAGCTTGGAACTTGGATGTACGTGTATTTGATCTAATGCTGGTGTTGGTCGCAAGATAGCTTGGTAGATTTCTAAGCTTCAAGATGACTCCCTGCATTATTGGTGGCTAACAAATTTACAAGTTGGAAATGGTTCCCCATCTGAGCCCTTTCTGAATAAGCTGGGAGATTCTGGAAGATGACAGAAAAAGCTAATAGAAAATGAAAGGGAGAGCTCAATCCTAATATGCAAACAAGATACGTCAATCCTTACTTCAACGTGGCTAGTGTTAAAGAATAATAAATTTAGGTAAGCCTATCTTCTAATTGGTTCAATATCTTTTAAAGACTTGTTTGGATAATTTTTTCTATTAAATATCTTTTAACTAACCATTTGGATTTGTAATTATAATCAGATGACACCTCTTACAAAAATAGGTCCAATAACATCATCATTGTTATTATAAAAAAAAGTGTGTTTGTTATAAGCTAGGATTCAAGTAATATGTAAGTGTTTGGTTGTCCCTTTACAAAAAGTGCGTCCAAATGTCTTTTAAACCCTAAAGTCTTTTAAAGACTTGTTTGGAGAAATTTCTCAATAAATCTTTTAACTAACCATTTGGATTTGTAATGTTATAATCAAATGACACGCGTTAACATTAAAATCGTCTTACAAAAATAGGTCCAATAACATTATTATTATTATAAAAAACAAAAGTTTGTTTGTTATAAACTAGGATTCAAGTAATGTGCAGGTGTTGTGTAGCCTATCCTTTACAAAAAGTGTGTTGAACTTGTTAGCACCCACATAATTTGTCAATTTGTAGGTGATCGAGTTATGAAGAATGTTAGTTAGTAAGACATTTCTAACTTCAATTTAAGATTGTTATATCAATTAATATTGAGTTTGTGGCAGTTAGCATTCTATGTGATCTAAGTATCAATTAAAATAATTTAAAAATTGAGGATTACAATGTGTTAATAGTTAGGATTTTCAAAGTTAAAAAAATTTAGGGTCTGTCTGTGCACTTAAACCTAGAATTAAGTGGCAAATGACATGATTTTTCTTCCTCGCCTATGGAAATTCTTCCTACACCCCATTTTAGGGGTGCATTTTCATTCCAGAATTGGAAATGCCATTTCGGAAGAAATTGTTGCTGTGCAGGAAAATATTGCCTAATTGACTGCTTATGTAGTTTTAGGCTGCTGTAAAAAATAGAACAAATTACACTAATTCTTGTTTCATTACACAACTGAAACTGAGAGGTAGAAGGGGGAAGGTGGAGATGACGCATAGGGTGGAGGCTGATTGTAAAGGGATGCAACCAGTGGCCATGATGCACAGGAGGGGAACAAAAGAAATGAG 4360 0.4112 MLVREKRPIFEPTLSEPGGVAWRSRFCCVSALFPQTSPYLHAPLTWVTSTALRPQRRHHLPPQPPPSPPPPLRLSCHPHQPVLDSSKCNSILPNLSPHEFDRLFLPLHHLVNPKTTSQFFRFASRRYNFRFTLRSYCLLLRSLLSSRFLPRARFLLTRLIDGLLPTPFPHRETRLLQLASSLLHLTLSSPKPLGELDLLLHILCSDSNSGFRYAFDIFIMFSKRSLFPSLKTCNFLLCSLVKANELHKSYQVFDLTCQAASPDVFTFTTAINAFCKGGRVADAVDLFCRIEGFGVSPNVVTYNSVIHGLCKSGRLDEAFRFKERMIRSKVNPSVVTYGVLINGLVKLERFEEVNQVLVEMYGKGIAPNEVVYNALIDGYCRKGYMLEALRVRDEMSFKGMKPNFVTFNTLLQGFCRSNQMEQAQQVLGYLLSSGLSVNMDACSYVIHRLLEKSCFDSALEIVKKLLSRNIKASDSLLTTLVCGLCKCEKQSDAIELWFKLAGKGLAANTVTSNALLHGLCERGDMEEVFEVLKQMVEKGLLLDGISYNTLIFGCCKWGKLEEAFKLKKEMVQQEFQPDTYTYNFLMKGLADVGKIDDVHRLLHEAEQYGVVPNVYTYALLLEGYSKADQIEEAEKLFNKLVYEKVELSAVVYNILIAAHCRVGNVMEAFKLRDAMKSRDILPTCATYSSLIHGMCCIGRVDEAKEIFEEMKNEGLFPNIFSYTALIGGYCKLGLMDNVKSILLEMSSNSIQPNKITYTIMIDGYCKLGNVKEATELLNEMIKNGITPDTVTYNILQKGYCKERELEVTLQSDHMSNAGLPLEEEITYNTLVHRLHPHTELFQTRDNFMSLIGFLIFVGSLDYRYPAFSVLEDTISSFRRCVAKQGLVAA 889
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00535 889 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 403 437 IPR002885 -
Pste7g00535 889 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 508 542 IPR002885 -
Pste7g00535 889 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 368 402 IPR002885 -
Pste7g00535 889 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 613 647 IPR002885 -
Pste7g00535 889 PANTHER MITOCHONDRIAL GROUP I INTRON SPLICING FACTOR CCM1 541 835 - -
Pste7g00535 889 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 753 787 IPR002885 -
Pste7g00535 889 Pfam PPR repeat family 367 416 IPR002885 -
Pste7g00535 889 Pfam PPR repeat family 297 346 IPR002885 -
Pste7g00535 889 Pfam PPR repeat family 757 801 IPR002885 -
Pste7g00535 889 Pfam PPR repeat family 545 590 IPR002885 -
Pste7g00535 889 Pfam PPR repeat family 649 695 IPR002885 -
Pste7g00535 889 Pfam PPR repeat 714 737 IPR002885 -
Pste7g00535 889 Pfam PPR repeat 609 639 IPR002885 -
Pste7g00535 889 Pfam PPR repeat 261 289 IPR002885 -
Pste7g00535 889 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 543 577 IPR002885 -
Pste7g00535 889 SUPERFAMILY HCP-like 455 655 - -
Pste7g00535 889 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 718 752 IPR002885 -
Pste7g00535 889 Gene3D Tetratricopeptide repeat domain 324 397 IPR011990 GO:0005515
Pste7g00535 889 NCBIfam pentatricopeptide repeat 513 543 IPR002885 -
Pste7g00535 889 NCBIfam pentatricopeptide repeat 755 789 IPR002885 -
Pste7g00535 889 NCBIfam pentatricopeptide repeat 545 579 IPR002885 -
Pste7g00535 889 NCBIfam pentatricopeptide repeat 370 403 IPR002885 -
Pste7g00535 889 NCBIfam pentatricopeptide repeat 720 753 IPR002885 -
Pste7g00535 889 NCBIfam pentatricopeptide repeat 405 438 IPR002885 -
Pste7g00535 889 NCBIfam pentatricopeptide repeat 686 719 IPR002885 -
Pste7g00535 889 NCBIfam pentatricopeptide repeat 615 640 IPR002885 -
Pste7g00535 889 NCBIfam pentatricopeptide repeat 265 299 IPR002885 -
Pste7g00535 889 NCBIfam pentatricopeptide repeat 580 614 IPR002885 -
Pste7g00535 889 NCBIfam pentatricopeptide repeat 300 333 IPR002885 -
Pste7g00535 889 NCBIfam pentatricopeptide repeat 335 369 IPR002885 -
Pste7g00535 889 NCBIfam pentatricopeptide repeat 650 684 IPR002885 -
Pste7g00535 889 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 333 367 IPR002885 -
Pste7g00535 889 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 578 612 IPR002885 -
Pste7g00535 889 Gene3D Tetratricopeptide repeat domain 115 323 IPR011990 GO:0005515
Pste7g00535 889 Pfam PPR repeat 510 540 IPR002885 -
Pste7g00535 889 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 648 682 IPR002885 -
Pste7g00535 889 Gene3D Tetratricopeptide repeat domain 490 593 IPR011990 GO:0005515
Pste7g00535 889 Gene3D Tetratricopeptide repeat domain 594 696 IPR011990 GO:0005515
Pste7g00535 889 Gene3D Tetratricopeptide repeat domain 697 845 IPR011990 GO:0005515
Pste7g00535 889 Gene3D Tetratricopeptide repeat domain 398 489 IPR011990 GO:0005515
Pste7g00535 889 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 298 332 IPR002885 -
Pste7g00535 889 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 263 297 IPR002885 -
Pste7g00535 889 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 683 717 IPR002885 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00535 573 840 Glycosyltransferase AT1G05670 26.885 7.18e-33 134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g00535 7 4968603 4974410 Pste7g00535 7 4968603 4974410 ECH