Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00516 ATGAATTGGGAGAGAATAAAAGTGAAAAGCAACATAAAGAACCTGCGAATGGTTCTTCAGTGGAAACGCCGAAGAGGCTTGTTGTATGTGGCTGCAGCTGCTGAGAGAGACGCTCGGCAAAGAAGGGAAGGGTTAATTGGTGCTGACTCTGCTGAGTATATGCCTATTGATAATGATGAGTTATCTTCTCCAAGAGAAAATCATGTGGGGAGAGTTCCTCTTCTTCCTTTGGTGTTTCTCATCTTCTATGAGGTTTCTGGGGGACCCTTTGGGGTTGAGGACACAGTGCATGCAGCAGGGCCTCTATTAGCCCTTCTGGGGTTCTTGGTTTTTCCATTCATATGGAGTGTTCCTGAGGCTCTGATCACTGCAGAGATGGGTACCATGTTCCCTGAGAACAGTGGTTATGTGGTTTGGGTCTCTTCTGCTTTGGGACCTTATTGGGGGTTTCAGCAAGGTTGGATGAAATGGCTAAGTGGGGTGATTGACAATGCTCTGTATCCAGTTCTGTTTCTTGATTATTTGAAATCAGGAATTCCTGCATTGGCAGGTGGGGTCCCCAGAACTGTTTCAACTTGGGCCTTAACTGTGCTTCTCACTTACTTGAACTACAGGGGTTTAACTATTGTGGGAGTGGTTGCTGTTCTTTTAGGTGTTTTCTCACTCTTTCCTTTTGTGGTCATGGGACTCTTGTCCATTCCTGACTTGAAACCTTCAAGATGGTGTGTGGCTAATCTTGATGATGTTGATTGGAATCTGTATTTCAACACTTTGTTTTGGAACCTTAATTATTGGGACTCTATTAGCACTCTTGCTGGGGAAGTGGAAAATCCAAGGAGAACTCTTCCCAAGGCTCTATTTTATGCTTTGATTCTTGTAGTTTTGGGATATTTCTTCCCTCTTTTGATTGGCACAGGTGCTGTTCCCCTCAATAGGGAGTTGTGGACTGATGGATACTTCTCAGATATTGCTAAGATCATTGGAGGAGTGTGGTTGAGGTGGTGGCTTCAGGCTGCTGCTGCAATGTCAAACATGGGAATGTTTGTTGCTGAAATGAGCAGTGACTCATTTCAGCTTCTAGGGATGGCTGAGAGGGGCATGTTACCTGAGTTCTTTAGCAAGAGGTCTCGTTATGGAACCCCTCTTATAGGAATACTCTTTTCAGCCTCTGGTGTGATTCTACTATCATGGTTGAGTTTTCAAGAGATTGTGGCTGCTGAAAATTTCTTGTACTGTTTTGGGATGATTTTGGAGTTTGTTGCATTCATATTGTTGAGGATCAAACACCCTAATGCATCTAGGCCTTACAAGATACCAGGGGGCACAACTGGAGCAGTTGCTATTTGCATTCCTCCCACAATTTTGATTTTTGTGGTGCTGGCTCTCTCCTCCAACAAAGTACTGGTTATAAGCCTCATTGCTGTTGGGATTGGCCTTCTAATACAACCTTGTCTTAAGATTTTGGAGGAAAGGAGGTGGATGAAGTTCTCAGTTAGGTTGAGCTCCAAGATTGACAATGAGAGAACTCAATCTTTTGTGAGCTAG 1545 0.4401 MNWERIKVKSNIKNLRMVLQWKRRRGLLYVAAAAERDARQRREGLIGADSAEYMPIDNDELSSPRENHVGRVPLLPLVFLIFYEVSGGPFGVEDTVHAAGPLLALLGFLVFPFIWSVPEALITAEMGTMFPENSGYVVWVSSALGPYWGFQQGWMKWLSGVIDNALYPVLFLDYLKSGIPALAGGVPRTVSTWALTVLLTYLNYRGLTIVGVVAVLLGVFSLFPFVVMGLLSIPDLKPSRWCVANLDDVDWNLYFNTLFWNLNYWDSISTLAGEVENPRRTLPKALFYALILVVLGYFFPLLIGTGAVPLNRELWTDGYFSDIAKIIGGVWLRWWLQAAAAMSNMGMFVAEMSSDSFQLLGMAERGMLPEFFSKRSRYGTPLIGILFSASGVILLSWLSFQEIVAAENFLYCFGMILEFVAFILLRIKHPNASRPYKIPGGTTGAVAICIPPTILIFVVLALSSNKVLVISLIAVGIGLLIQPCLKILEERRWMKFSVRLSSKIDNERTQSFVS 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00516 514 PIRSF AA_transporter 57 510 - -
Pste7g00516 514 FunFam Amino acid permease, putative 69 497 - -
Pste7g00516 514 Pfam Amino acid permease 86 478 IPR002293 GO:0016020|GO:0022857|GO:0055085
Pste7g00516 514 PANTHER POLYAMINE TRANSPORTER PUT1 63 502 IPR044566 GO:0022857
Pste7g00516 514 Gene3D Amino acid/polyamine transporter I 77 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00516 Pste-Chr7 4816210 4822788 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00516 49 511 Organic Solute Cotransporters AT1G31830 73.391 0.0 700
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g00516 7 4816210 4822788 Pste7g00516 7 4816210 4822788 ECH
Pste1g00200 1 727047 728774 Pste7g00516 7 4816210 4822788 PCT