LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pste7g00410	ATGCCTCAGCGTTCGAACCAGAATCAACCGATACCATACACGCACAGTTCAAAGCTCTCTCCATCGCGAAACGTTGATTTCTTTTCCCACTCTCACGTGATTGTTCAAATCGCACACTCCTCGAGCGATTCTTCAACAGCAAGGAGTGGATCCGAGAAGATGAGCCAGAGTATCTTCCACCAAACGGTGCTTTGTCAAACGCAAACGGTTGCGGAGCATCAAAGTAAGGTTAGTTCCTTCGGCAAGAGTGCGAACAAAGGAAAGAAGAGCGTTTCGCTTCCTATAAATTTTCGCGGGAACAGGTTGTGTGTGAGGAAACGCAAATTCGCCATGGGAAAGCACCGGCACGTCGACGCTATTCCACGCGCCGTTGCTGTGTTAACTGTATTTTTTTGCCTGGAGCAGCTTTCTGGGAAATTCAACCTTGATGGAAATATTGAGTTGCAGGTTGGTGTTGTTTCTTCAGAACCAGGAGCCGTAAAACAAGTAGATATTGAGGTTTCATATAATAGTGACTCTCTGCTTTTACATTGGGGAGTTGTCCATGATCAGCCAGGGAAGTGGATACTTCCTTCTCGTCACCCAGATGGAACTAAAGTATATAAGAACAGAGCTCTTAGAACTCCTTTTGTGAAATCTGACTCGGGATCCTTCCTTAAAATAGAAATTGGCGATCCTGCTGCACAAGCCATTGAGTTCCTCATACTTGATGAGGCTAAAAATAAGTGGTTTAAAAATAACGGTGAGAACTTTCACATCAAGTTACCAGTAAAAAATAAGCTACCTCAAGATGTTTTAGTTCCTGAAGACCTTGTACAGATTCAAGCATATCTTAGATGGGAACGGAAGGGGAAGCAGATGTACAGTCCAGAGCAAGAGAAGGAGGAATATGAAGCCGCTCGGAATGAACTATTGGAGGAAGTTTCTAGGGGTACTTCTGTTCAAGATCTCCGTGCAAGATTAACTAACAAAAATAAAGCTGCTGAAGTAGAGGAGCCTTCTGTTTCTGAAACGAAGACCATCCCTGATGAACTTGTACAGATTCAAGCTTATATACGCTGGGAAAAAGCTGGGAAGCCTAACTACTCCCAGGAACAACAACTTATGGAATTTGCGGAAGCAAGAAAAGAATTGTCAGCGGAGCTTGAGAAGGGTGCTTCGCTGGATGAGATACGGAAGAAGATTGTCAAAGGAGAAATACAAACTAAAGTTTCAAAGCAATTGAAAACCAAAAAATACTTCCGTTCTGAAAGAATACAGAGGAAGAAGAGAGATTTGATGCAGCTTATCAACCGAAATGTCGCTGAAAATATAGTTGAACAATTTATAGATGTTCCAAAAGCCTTGACAGTAATTGAACAATATGCCAACGCATGGGAAGAATATGAAAGTGGTCCTGTTTTGAGTAAGACCATATACAAGCTAGATGATAATGATCTTCTGGCCATTGTTACCAAGGATGCTGGTAAGATTAAGGTTCACCTGGCTACAGACTCAAAACAACCTTTTACACTTCACTGGGCCGTATCTAAAACATCATCTGAAGAGTGGTTGGTACCACCTGCAACTGCTCTGCCCCCTGGATCTGTTACTTTGAGTGAGGCTGCTGAAACACCTTTTAAAGCTGGTTCTTCGTCTCATACTTCTTATGAGGTCCAGTCTTTGGATATAGAGGTTGATGATGATACTTTTAAAGGAATACCTTTTGTCATTTTGTCGGATGGAAAATGGATAAAGAACAAGGGATCAAATTTTTATATTGAATTTGGAGGGAAGAAGCAGATTCAAAAGGATTTTGGTGATGGAAAAGGTACAGCCAAGTTCTTGTTGCATAAAATAGCGGAAAATGAAAGTGAGGCACAAAAGTCCTTCATGCATCGATTTAACATTGCATCAGATTTGATAGATGAAGCCAAAAATGCTGGTAAACCTGGCCTTGCAGGAATTTTGGTGTGGATGAGATTTATGGCTACAAGGCAGCTCATATGGAACAAAAATTACAATGTGAAGCCACGTGAGATAAGTAAAGCACAGGATAGACTTACAGACTTGCTCCAGGATGTTTATGCGAGTTATCCACAGTATAGGGAAATTGTGAGGATGATCTTGTCTACTGTGGGTCGTGGAGGTGAAGGAGATGTTGGACAGAGGATTCGGGATGAAATCCTTGTTATCCAGAGAAATAATGATTGCAAAGGTGGAATGATGGAGGAATGGCATCAGAAGTTACACAACAACACTAGTCCTGATGATGTTGTAATCTGTCAGGCACTAATTGATTATATAAATAGTGACTTTGATATTGGTGTTTACTGGAAAACATTGAATGACAATGGAATAACAAAAGAACGGCTTCTGAGCTATGACCGTGCCATCCATTCTGAACCAAATTTTAGGAGAGAACAGAAGGAAGGTCTTCTACGAGACCTGGGAAACTATATGAGGACTTTGAAGGCAGTTCATTCTGGTGCAGATCTTGAATCTGCTATTGCAAATTGTATGGGCTACAAATCTGAGGGTCAGGGCTTCATGGTAGGGGTGCAGATAAATCCAGTGCCGGGTTTGCCTGCTGGTTTTCCGGAATTACTTGAGTTTCTCTTGGAACATGTTGAAGAAAAGAATGTTGAACCACTTTTAGAGGAACAAAATCTCCTTAAAGCTCAAAGTCGTCTGAAAGATCTTATATTTTTGGATGTTGCCCTTGATTCTACAGTTAGAACAGCAGTGGAAAGGAGTTATGAGGAATTAAACAATGCTGGACCTGAGAAAATAATGTATTTCATTTGCTTGGTTCTTGAAAATCTCGCACTTTCGTCGGATGACAATGAAGATCTTATCTACTGTTTGAAGGGATGGGATCTTGCCTTAAGCATGTGCAAGAGTAAAGATTCTCAGTGGGCACTGTATGCAAAATCAGTACTAGACAGAACCCGACTTGCACTCACAAACAAGGCTAATTTATACCAGGAAATTCTGCAACCATCAGCAGAATACCTTGGATCACTGCTTGGTGTGGACAGATGGGCTGTGGAAATATTTACTGAAGAAATTATCCGTGCTGGATCTGCTGCTTCTTTGTCCACTATTCTAAATCGACTTGATCCTGTGCTCCGAAAGACAGCTAATCTTGGAAGCTGGCAGATTATTAGCCCAGTTGAAACTGTTGGATATGTTGAGGTTGTAGACGAGTTGCTCGCTGTTCAACACAAATCATACGAGCGACCTACAGTTTTGATAGCCAAACGTGTGAAAGGAGAGGAAGAAATTCCAGATGGTACAGTTGCTGTCCTGACACCTGATATGCCTGATGTCCTATCCCATGTTTCTGTACGAGCAAGAAATAGCAAGGTGTGTTTTGCTACATGCTTTGATCCCAATATCCTGGCTCACCTCGAAGCAAAAAAAGGAAAGCTTTTGCGTTTAGAGCCTACATCTGATGATGTAGTTTATAGTGAGGTCAAGGAGGGTGAGTTTATTCATGACAAATCTACTCAACTGAAAGATGTTGATTCCGTGTCTCCCATATCTCTGGCTAGAAAGAAGTTTATTGGTAGATATGCCATCTCATCTGAAGAATTCACTGGCGAAATGGTTAGGTTTCAAAATTCTGTTAACTTATGGTTAGGCACTTATGGTTTTCAAATGGTTAGGTTAGACTGTCTTTCTACCCATCAAAATGCACTAGATGTTGGAGCTAAATCTCGTAATATATCTTATTTAAAAGGGAAAGTAGCTTCTTGGATTGGAATTCCAACCTCAGTTGCCATACCATTTGGAGTTTGTGAAAAAGTTCTTTCTGATACATCTAATCAGGCTGTGGCTGAGAGGATCAATATTTTGAAAAAAAAGTTAATAGAGGGAGACTTCAGTGTTCTCAAGGAGATCCGCGAAACAGTTCTACAGTTGAATGCACCATCCCAGTTGGCAGAGGAGTTGAAAACTAAAATGAAGAGTTCTGGAATGCCTTGGCCGGGTGATGAAAGTGAACAACGATGGGAACAAGCTTGGACGGCTATAAAAAAGGTGTGGGGCTCAAAATGGAATGAAAGAGCATACTTCAGCACAAGAAAAGTGAAGCTGGACCACGAATATCTTTCCATGGCTGTCCTTGTTCAGGAAGTGGTAAATGCTGACTATGCTTTTGTCATCCACACAACTAACCCTTCCTCTGGAGATTCATCAGAAATATATGCTGAGGTAGTAAAGGGACTTGGAGAAACACTGGTTGGAGCTTATCCTGGTCGTGCTTTGAGTTTTATCTGCAAAAAGAGTGATTTGAACTCTCCTCAGGTCTTGGGTTATCCTAGCAAACCTGTTGGCCTATTTATAAGACAATCGATCATTTTTCGATCTGATTCCAATGGTGAAGATCTAGAAGGTTATGCTGGTGCAGGTCTTTATGACAGTGTGCCAATGGACGAAGCGGAGGAGGTGGTGGTTGATTACACCTCAGACAAACTGATCCTTGATGGAAGCTTTCGGCAGTCAATCTTGTCAAGCATTGCCTGTGCAGGAAATGAAATTGAAGAGTTGTATGGCTCTCCTCAGGACATTGAAGGTGTCATCAAGGATGGAAAAGTCTATGTTGTCCAGACCAGACCACAAATGTAGACCTCCATACCTGTATGTTGTAAACCACCTAACTCAACAATGTGCACATGTTGTTTCAAACGTGTCCGTGCAACTTCTGCGAGTTCAAGAGTGAACCTGCGGATTACCAATTGGCTTCATAGATGTAATTTCAAGCCATATATTAAACATTAAGGAATAATTTGTAAGTGTATAAACATAGGATAATGTAAATTAAGAAAAATTTAAATGGGGTCTTATTCTTTTTCCCTACTAAATATTATATCTGAAGTTACCTTTTCCTAATCAGGACTGTATTTGTACTTGAGGTGTATGGACTTTGATTAGGTTTTTTTATAATATGC	4934	0.4102	MPQRSNQNQPIPYTHSSKLSPSRNVDFFSHSHVIVQIAHSSSDSSTARSGSEKMSQSIFHQTVLCQTQTVAEHQSKVSSFGKSANKGKKSVSLPINFRGNRLCVRKRKFAMGKHRHVDAIPRAVAVLTVFFCLEQLSGKFNLDGNIELQVGVVSSEPGAVKQVDIEVSYNSDSLLLHWGVVHDQPGKWILPSRHPDGTKVYKNRALRTPFVKSDSGSFLKIEIGDPAAQAIEFLILDEAKNKWFKNNGENFHIKLPVKNKLPQDVLVPEDLVQIQAYLRWERKGKQMYSPEQEKEEYEAARNELLEEVSRGTSVQDLRARLTNKNKAAEVEEPSVSETKTIPDELVQIQAYIRWEKAGKPNYSQEQQLMEFAEARKELSAELEKGASLDEIRKKIVKGEIQTKVSKQLKTKKYFRSERIQRKKRDLMQLINRNVAENIVEQFIDVPKALTVIEQYANAWEEYESGPVLSKTIYKLDDNDLLAIVTKDAGKIKVHLATDSKQPFTLHWAVSKTSSEEWLVPPATALPPGSVTLSEAAETPFKAGSSSHTSYEVQSLDIEVDDDTFKGIPFVILSDGKWIKNKGSNFYIEFGGKKQIQKDFGDGKGTAKFLLHKIAENESEAQKSFMHRFNIASDLIDEAKNAGKPGLAGILVWMRFMATRQLIWNKNYNVKPREISKAQDRLTDLLQDVYASYPQYREIVRMILSTVGRGGEGDVGQRIRDEILVIQRNNDCKGGMMEEWHQKLHNNTSPDDVVICQALIDYINSDFDIGVYWKTLNDNGITKERLLSYDRAIHSEPNFRREQKEGLLRDLGNYMRTLKAVHSGADLESAIANCMGYKSEGQGFMVGVQINPVPGLPAGFPELLEFLLEHVEEKNVEPLLEEQNLLKAQSRLKDLIFLDVALDSTVRTAVERSYEELNNAGPEKIMYFICLVLENLALSSDDNEDLIYCLKGWDLALSMCKSKDSQWALYAKSVLDRTRLALTNKANLYQEILQPSAEYLGSLLGVDRWAVEIFTEEIIRAGSAASLSTILNRLDPVLRKTANLGSWQIISPVETVGYVEVVDELLAVQHKSYERPTVLIAKRVKGEEEIPDGTVAVLTPDMPDVLSHVSVRARNSKVCFATCFDPNILAHLEAKKGKLLRLEPTSDDVVYSEVKEGEFIHDKSTQLKDVDSVSPISLARKKFIGRYAISSEEFTGEMVRFQNSVNLWLGTYGFQMVRLDCLSTHQNALDVGAKSRNISYLKGKVASWIGIPTSVAIPFGVCEKVLSDTSNQAVAERINILKKKLIEGDFSVLKEIRETVLQLNAPSQLAEELKTKMKSSGMPWPGDESEQRWEQAWTAIKKVWGSKWNERAYFSTRKVKLDHEYLSMAVLVQEVVNADYAFVIHTTNPSSGDSSEIYAEVVKGLGETLVGAYPGRALSFICKKSDLNSPQVLGYPSKPVGLFIRQSIIFRSDSNGEDLEGYAGAGLYDSVPMDEAEEVVVDYTSDKLILDGSFRQSILSSIACAGNEIEELYGSPQDIEGVIKDGKVYVVQTRPQM	1536

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pste7g00410	1536	SUPERFAMILY	Glutathione synthetase ATP-binding domain-like	1230	1535	-	-
	Pste7g00410	1536	Gene3D	-	1376	1535	-	-
	Pste7g00410	1536	Pfam	Pyruvate phosphate dikinase, AMP/ATP-binding domain	1333	1535	IPR002192	GO:0005524\|GO:0016301\|GO:0016310
	Pste7g00410	1536	Gene3D	-	1218	1375	IPR013815	GO:0005524
	Pste7g00410	1536	PANTHER	ALPHA-GLUCAN WATER DIKINASE 1, CHLOROPLASTIC-RELATED	1230	1536	-	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pste7g00410	163	262	Glycoside Hydrolase	AT1G69830	32.039	4.19e-06	49.7

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pste7g00410	7	3961404	3987232	Pste7g00410	7	3961404	3987232	ECH