Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00381 GTCATTAGTTTCAATTCATGCAATCAACTTACTGTTAGTTACTTGAACATTGTTAACAGTCCAAGGGGTCACTTAAGCATCAGTAATTGTCAGGGTGCTCACTTTTCTTATATTTCTATTACTGCTCCTGGCTCTAGTCCTAACACTGATGGAATTGACATTTCTGATTCCAAAAATATCTTCATAACTTATTCCAAAATAGCATCTGGAGATGATTGTATTGCTGTTGGAGGTGGTTGTTCTTACATCAATATTTCTGGGATTGATTGTGGACCGGGCCATGGAATAAGCATTGGCAGCCTGGGTAAGCATTATGATACAGTCTCTGATGTTCACATACAAAATTGCAACTTCACGGGCACTACAAATGGGGCAAGAATCAAGACATTCTCGGTAAGTAAC 402 0.3881 VISFNSCNQLTVSYLNIVNSPRGHLSISNCQGAHFSYISITAPGSSPNTDGIDISDSKNIFITYSKIASGDDCIAVGGGCSYINISGIDCGPGHGISIGSLGKHYDTVSDVHIQNCNFTGTTNGARIKTFSVSN 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00381 134 Gene3D - 1 134 IPR012334 -
Pste7g00381 134 PANTHER - 2 130 - -
Pste7g00381 134 Pfam Glycosyl hydrolases family 28 2 131 IPR000743 GO:0004650|GO:0005975
Pste7g00381 134 SMART pbh1 57 78 IPR006626 -
Pste7g00381 134 SMART pbh1 30 56 IPR006626 -
Pste7g00381 134 SMART pbh1 108 129 IPR006626 -
Pste7g00381 134 SMART pbh1 80 100 IPR006626 -
Pste7g00381 134 SUPERFAMILY Pectin lyase-like 2 130 IPR011050 -
Pste7g00381 134 ProSitePatterns Polygalacturonase active site. 87 100 IPR000743 GO:0004650|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00381 Pste-Chr7 3623881 3624735 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00381 2 131 Glycoside Hydrolase AT3G15720 57.576 7.82e-43 143
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g00381 7 3623881 3624735 Pste7g00381 7 3623881 3624735 ECH