Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00367 GCTTTGCGACTCCGTGGTTGTAATAATCTTACTGTAAATTTTCTGAGAATGAGTAATAGCCCTGGAGCTCACATATCTGTAAATGGTTGCAACGGTGCAATATTCTCTCATATGAATATTAAAGCTCCTCCGCATAGTCCCAACACTGATGGCTTTGATATTGCTGGTTCCCAAAATATATTGATACAAAATTCTACCATAGGAACTGGTGATGATTGCATTGCCATAAATGGTGGCTCCTCTAACATCAATGCTACTAGACTTGCGTGTGGACCAGGGCATGGAATAAGCATTGGGAGCCTTGGTAGAAATTATTCCCATGAGATAGTTGAAGATGTATATGTACGTAATTGTAGCTTCACTCGGACTACAAATGGAGCAAGAATCAAGACATGGCCG 399 0.4085 ALRLRGCNNLTVNFLRMSNSPGAHISVNGCNGAIFSHMNIKAPPHSPNTDGFDIAGSQNILIQNSTIGTGDDCIAINGGSSNINATRLACGPGHGISIGSLGRNYSHEIVEDVYVRNCSFTRTTNGARIKTWP 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00367 133 Pfam Glycosyl hydrolases family 28 2 132 IPR000743 GO:0004650|GO:0005975
Pste7g00367 133 SUPERFAMILY Pectin lyase-like 2 132 IPR011050 -
Pste7g00367 133 PANTHER - 2 132 - -
Pste7g00367 133 ProSitePatterns Polygalacturonase active site. 87 100 IPR000743 GO:0004650|GO:0005975
Pste7g00367 133 Gene3D - 1 133 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00367 Pste-Chr7 3485002 3486304 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00367 1 132 Glycoside Hydrolase AT5G27530 58.333 5.98e-46 152
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g00367 7 3485002 3486304 Pste7g00367 7 3485002 3486304 ECH