Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g04276 atgagggtggtgagagcgttaatggtggctcggatgttgacgcgggaccactcggtccctgtccttacgaacgaaagcataccattcggatcggtgtggtggttcacctatgccggcatctcctgtctcctcgtcctcttcgccggcatcatgtcgggtctcaccctcggcctcatgtctctgggcctcgtcgacctcgaaattctcgagcgcagtggttctcctgctgagaaaatgcaagccgcggtcatacttcccgtggttaaaaaacaacaccagcttcttgtcaccctccttctctgcaatgctgttgccatggaggctctcccgttataccttgatagactattcaatcagtttgttgctatcattctctctgttactttcgttctctttttcggggaggttattccgcaagcaatttgcagtaggtatggtcttgctgtgggtgctaactttgcatggttagtgcggattttaatgatcatctgttatcccgtttcttatcctgttggaaaggttctggattacctattggggcataatgaggctttatttagacgagctcagttaaaagcccttgtctccattcacagccaggaggctgggaaaggtggtgaacttacacatgatgaaacaacaattatcagtggagcacttgatttgactgaaaaggaagtgtcaatactcaatggtgttggacatgaaatgactgctgaggaggctatgactcctattgaatcaacattttctttggatgttaattcaaaattggattgggaagcaatgggtaaaattcttgctcgtgggcacagccgagttcctgtctattctggaaatccaaggaatattattgggcttctactggtcaaaagtcttcttactgtgcgaccagaaacagagacacctgtcagtgctgtatccatccgcagaattccaagggttccatctgatatgcctctgtatgatatactaaatgagtttcaaaagggcagtagtcatatggctgctgttgttaaggctaagggaaaaagcaaagaaactccacaaatcattgatgaagagaaaaatgaagagaacaaaagcattgatggagattcacagttgaccattccattactacagaagcaggatgcaaaatcaggaagtgttgttgttgacattgtaaagccttcaaagccttccagtgttaataagctgagtggtctgcaacgtagtgatagcgcaactaatggcccctcttcagaaaatattgaagatggtgaagtgattggtattatcactttggaagatgtatttgaggaacttctgcaagaagaaattgttgatgagacagatgaatatgttgatgttcataagagaatacgtgttgctgccgctgccgctgcttcctcagtggcccgagctccatcatcaagaaggttgactaaccaaaagggagcagggggccaaattaagccagggcaaactccgaagaaatctgcagaggaaaatggattgaattctacaaagtaa 1515 0.0 MRVVRALMVARMLTRDHSVPVLTNESIPFGSVWWFTYAGISCLLVLFAGIMSGLTLGLMSLGLVDLEILERSGSPAEKMQAAVILPVVKKQHQLLVTLLLCNAVAMEALPLYLDRLFNQFVAIILSVTFVLFFGEVIPQAICSRYGLAVGANFAWLVRILMIICYPVSYPVGKVLDYLLGHNEALFRRAQLKALVSIHSQEAGKGGELTHDETTIISGALDLTEKEVSILNGVGHEMTAEEAMTPIESTFSLDVNSKLDWEAMGKILARGHSRVPVYSGNPRNIIGLLLVKSLLTVRPETETPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVKAKGKSKETPQIIDEEKNEENKSIDGDSQLTIPLLQKQDAKSGSVVVDIVKPSKPSSVNKLSGLQRSDSATNGPSSENIEDGEVIGIITLEDVFEELLQEEIVDETDEYVDVHKRIRVAAAAAASSVARAPSSRRLTNQKGAGGQIKPGQTPKKSAEENGLNSTK 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g04276 504 Gene3D - 233 359 IPR046342 -
Pste6g04276 504 MobiDBLite consensus disorder prediction 469 484 - -
Pste6g04276 504 MobiDBLite consensus disorder prediction 342 365 - -
Pste6g04276 504 MobiDBLite consensus disorder prediction 396 418 - -
Pste6g04276 504 PANTHER METAL TRANSPORTER CNNM 22 480 IPR045095 GO:0010960
Pste6g04276 504 MobiDBLite consensus disorder prediction 466 504 - -
Pste6g04276 504 FunFam DUF21 domain-containing protein isoform A 372 444 - -
Pste6g04276 504 MobiDBLite consensus disorder prediction 396 417 - -
Pste6g04276 504 FunFam DUF21 domain-containing protein At4g14240-like 212 361 - -
Pste6g04276 504 Pfam Cyclin M transmembrane N-terminal domain 40 211 IPR002550 -
Pste6g04276 504 MobiDBLite consensus disorder prediction 346 363 - -
Pste6g04276 504 CDD CBS_pair_CorC_HlyC_assoc 238 343 IPR044751 -
Pste6g04276 504 Gene3D - 387 444 IPR046342 -
Pste6g04276 504 ProSiteProfiles CNNM transmembrane domain profile. 30 212 IPR002550 -
Pste6g04276 504 SUPERFAMILY CBS-domain pair 235 438 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g04276 Pste-Chr6 31986037 31995699 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g04276 6 31986037 31995699 Pste6g04276 6 31986037 31995699 ECH
Pste6g04276 6 31986037 31995699 Pste2g02468 2 24922081 24935592 PCT