Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g04157 atgttcagtccaagcatggattctgcgagggatgcgagtggtgtggcagggactgtgctaattcctatgcgctttgtgtggccatatgggggaagaagtgtatatctaagtggttctttcacacggtggtctgaacttctacaaatgtcgccagtggaaggctgcccaactgtgtttcaagttattcatagcttggcacccggttatcaccagtacaaattttttgttgatggagaatggcggcacgatgaacatcaaccttatgtatctggagaatatgggatagttaacactgttttattagctactgatcctaatattgtacctgttttaactcctgacatagtttctggatctaacatggatgtggataatgaggcttttcgacgcatggtccgattgacagatggtacattaagtaatgtgttgttgccaagaatatcagatgctgatgcacagacctctcgtcagcgtatctctgcattcctatctatgcacacagcatatgaattacttcctgagtcaggcaaggtcgttaccttggatgttgatctgccagtgaaacaggcatttcacatactgcatgagcagggaattcccatggctcctctttgggacttctgcaaggggcagtttgttggagttcttagtgcattggattttattttaattttaagagagctcggaaatcatgggtccaatctgacagaagaggaacttgaaacacataccatatcagcttggaaagaaggaaaaaggacaggatttacacaatgttttatccgagtaagtgttttacgtagccttatctggccttgttctagccctgtgtctacaggaattacagttggatccaaacccaatagagctgattgttcgaccaaggatctgctcaaaaggcacatcgtgtgtttatgggaaaggttgggggaggctaccatgtggaggatagtcacacttgatggcaagattgttgaatgcaagtttgaaggaaaagtcccacattgggcagggccatatgataatttgaaagagattactgtgaagatcctgcaaaatggaatttcaacagttcctattatccattcatcttccgaagatggttcatttccacagctactacatcttgcttcactttcaggaatccttaaatgcatttgcaggtattttaggaattgttctagttcattgcctatacttcaacttccaatttgtgcaatccctgtgggcacatgggtgccccaaattggggagtcaaatcgccagcctctggcaatgttgagaccaaatgcttcacttacttcagcgctaaacttattagttcaagctcaagtaagttcaataccagtagttgatgatagtgactcattactggatatatattgtcgaagtgatataacagctttggcaaaggacagaacttatacacacattaatcttgatgaaatgacggttcatcaagtaagcattacaattgggccaggattcttacaatccttacgagctgagaaatcaaagatgtcagatgtgtttgcgaactga 1542 0.0 MFSPSMDSARDASGVAGTVLIPMRFVWPYGGRSVYLSGSFTRWSELLQMSPVEGCPTVFQVIHSLAPGYHQYKFFVDGEWRHDEHQPYVSGEYGIVNTVLLATDPNIVPVLTPDIVSGSNMDVDNEAFRRMVRLTDGTLSNVLLPRISDADAQTSRQRISAFLSMHTAYELLPESGKVVTLDVDLPVKQAFHILHEQGIPMAPLWDFCKGQFVGVLSALDFILILRELGNHGSNLTEEELETHTISAWKEGKRTGFTQCFIRVSVLRSLIWPCSSPVSTGITVGSKPNRADCSTKDLLKRHIVCLWERLGEATMWRIVTLDGKIVECKFEGKVPHWAGPYDNLKEITVKILQNGISTVPIIHSSSEDGSFPQLLHLASLSGILKCICRYFRNCSSSLPILQLPICAIPVGTWVPQIGESNRQPLAMLRPNASLTSALNLLVQAQVSSIPVVDDSDSLLDIYCRSDITALAKDRTYTHINLDEMTVHQVSITIGPGFLQSLRAEKSKMSDVFAN 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g04157 513 SUPERFAMILY CBS-domain pair 421 485 IPR046342 -
Pste6g04157 513 CDD E_set_AMPKbeta_like_N 22 100 - -
Pste6g04157 513 SMART cbs_1 177 226 IPR000644 -
Pste6g04157 513 SMART cbs_1 423 471 IPR000644 -
Pste6g04157 513 Pfam CBS domain 422 467 IPR000644 -
Pste6g04157 513 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 152 489 - -
Pste6g04157 513 ProSiteProfiles CBS domain profile. 419 476 IPR000644 -
Pste6g04157 513 Gene3D Immunoglobulins 18 101 IPR013783 -
Pste6g04157 513 ProSiteProfiles CBS domain profile. 171 233 IPR000644 -
Pste6g04157 513 Gene3D - 147 394 IPR046342 -
Pste6g04157 513 Gene3D - 395 507 IPR046342 -
Pste6g04157 513 FunFam Sucrose nonfermenting 4-like protein 18 103 - -
Pste6g04157 513 Pfam Glycogen recognition site of AMP-activated protein kinase 21 103 IPR032640 -
Pste6g04157 513 SUPERFAMILY CBS-domain pair 157 392 IPR046342 -
Pste6g04157 513 SUPERFAMILY E set domains 21 102 IPR014756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g04157 Pste-Chr6 30891553 30901044 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g04157 6 30891553 30901044 Pste6g04157 6 30891553 30901044 ECH
Pste6g04157 6 30891553 30901044 Pste2g03213 2 32016925 32029248 PCT