Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g04147 atggaggaaccgaccaaattgaagcgtgcagtaatcgattcctgggctggggcgatttccggtggaatatcacgaacagttacctcgccccttgatgttattaagattcgattccaggttcagctggagcccacgtcttcatgggctttactacgcaaggatttggctgcagctgcggctgcaccatcaaaatatactggtatgtttcaagcaagcagagatattcttagagaggaaggtgtccaggggttttggcggggaaatgtacccgcattacttatggtcatgccttatacgtctatacaatttacggtgttacacaagttgaagacttttgcctctggttcttccaagacagagaatcacattaatttgagcccttatctgtcctacgtcagtggggcattagctgggtgtgcggctacagtaggttcatatccatttgatcttctccggaccatattagcctctcaaggtgaaccaaaggtatatccaaacatgaggtcagcattcatcgatattgtccagactcgcggattcctaggcttgtattctggattgtcaccaactcttgtggagattataccttatgcaggcctacaatttggcacatatgatacatttaagcgttgggtcatgaatcagaatgactcaatgcaacaggaagttattcctattcacttaggtgtgatgactgctgctgatgcagtttggaatcatagatattccaacactgctgcagaagataacctctccagctttcagcttttcctttgtgggttggcagctggaacatgtgccaaacttgtctgtcatccacttgatgtcgtcaagaaaagatttcagattgaagggcttcaaaggcacccaagatatggagctcgagttgagcatcgtgcatacaggaatatgttagatgccatgcaacggataatgcgatcagagggttgggctggtctttacaagggtataatcccatcaactgttaaagctgcacctgctggtgctgtgacatttgttgcttatgaattgacatcagattggttagagtccactttcagttga 1065 0.0 MEEPTKLKRAVIDSWAGAISGGISRTVTSPLDVIKIRFQVQLEPTSSWALLRKDLAAAAAAPSKYTGMFQASRDILREEGVQGFWRGNVPALLMVMPYTSIQFTVLHKLKTFASGSSKTENHINLSPYLSYVSGALAGCAATVGSYPFDLLRTILASQGEPKVYPNMRSAFIDIVQTRGFLGLYSGLSPTLVEIIPYAGLQFGTYDTFKRWVMNQNDSMQQEVIPIHLGVMTAADAVWNHRYSNTAAEDNLSSFQLFLCGLAAGTCAKLVCHPLDVVKKRFQIEGLQRHPRYGARVEHRAYRNMLDAMQRIMRSEGWAGLYKGIIPSTVKAAPAGAVTFVAYELTSDWLESTFS 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g04147 354 PRINTS Mitochondrial carrier protein signature 184 202 IPR002067 GO:0055085
Pste6g04147 354 PRINTS Mitochondrial carrier protein signature 13 26 IPR002067 GO:0055085
Pste6g04147 354 PRINTS Mitochondrial carrier protein signature 26 40 IPR002067 GO:0055085
Pste6g04147 354 PRINTS Mitochondrial carrier protein signature 87 107 IPR002067 GO:0055085
Pste6g04147 354 PRINTS Mitochondrial carrier protein signature 140 158 IPR002067 GO:0055085
Pste6g04147 354 FunFam Mitochondrial thiamine pyrophosphate carrier 1 4 351 - -
Pste6g04147 354 ProSiteProfiles Solute carrier (Solcar) repeat profile. 8 112 IPR018108 -
Pste6g04147 354 ProSiteProfiles Solute carrier (Solcar) repeat profile. 125 211 IPR018108 -
Pste6g04147 354 Pfam Mitochondrial carrier protein 14 113 IPR018108 -
Pste6g04147 354 Pfam Mitochondrial carrier protein 126 215 IPR018108 -
Pste6g04147 354 Pfam Mitochondrial carrier protein 251 350 IPR018108 -
Pste6g04147 354 SUPERFAMILY Mitochondrial carrier 8 343 IPR023395 -
Pste6g04147 354 Gene3D Mitochondrial carrier domain 5 352 IPR023395 -
Pste6g04147 354 PANTHER SOLUTE CARRIER FAMILY 25 11 349 - -
Pste6g04147 354 ProSiteProfiles Solute carrier (Solcar) repeat profile. 251 348 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g04147 Pste-Chr6 30786089 30790773 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g04147 1 354 Organic Solute Cotransporters AT3G21390 69.916 0.0 513
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g04147 6 30786089 30790773 Pste2g03197 2 31844035 31848902 PCT