Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g04062 atgatgggtatcataacgtgtgaaagcgaacacgttacccctgtctccgctgcaacattgtacaaagcgattgtcctagattccagcaatgtgttgccaaaagcattgcccaacttcattaagagcgtcgaaaccattgaaggagacggagggccaggaaccatcaagaaccttactcttgctcaaggcttaggatatgtgaagcaccgcgtagatgcaattgacacacaaaactatgtgtacaactatagtgtgattgaagggagtacactatccgaggcatttgagaagatatgttatgagtacaaattagtggcaaccccagatggaggaaccattgtcaagtctacaagcaaattctataccaaaggtgattaccaacttgctcaacaatatgtcaacactagcaaggacagatctgctcgcttcaccaacactattgaacatttcattctcgctaatgcctacaactaa 474 0.0 MMGIITCESEHVTPVSAATLYKAIVLDSSNVLPKALPNFIKSVETIEGDGGPGTIKNLTLAQGLGYVKHRVDAIDTQNYVYNYSVIEGSTLSEAFEKICYEYKLVATPDGGTIVKSTSKFYTKGDYQLAQQYVNTSKDRSARFTNTIEHFILANAYN 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g04062 157 Pfam Pathogenesis-related protein Bet v 1 family 6 153 IPR000916 GO:0006952
Pste6g04062 157 PRINTS Major pollen allergen Bet V1 signature 84 97 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Pste6g04062 157 PRINTS Major pollen allergen Bet V1 signature 4 24 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Pste6g04062 157 PRINTS Major pollen allergen Bet V1 signature 27 37 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Pste6g04062 157 PRINTS Major pollen allergen Bet V1 signature 65 84 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Pste6g04062 157 PRINTS Major pollen allergen Bet V1 signature 143 153 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Pste6g04062 157 PRINTS Major pollen allergen Bet V1 signature 109 125 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Pste6g04062 157 PANTHER - 2 154 - -
Pste6g04062 157 CDD Bet_v1-like 6 128 - -
Pste6g04062 157 SUPERFAMILY Bet v1-like 5 154 - -
Pste6g04062 157 FunFam Major pollen allergen Bet v 1-A 2 157 - -
Pste6g04062 157 Gene3D - 1 157 IPR023393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g04062 Pste-Chr6 29921939 29926216 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g04062 6 29921939 29926216 Pste6g04062 6 29921939 29926216 ECH