Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g04056 atggctcctgctaccctttacaaagctcttgttaaggatgctgataacctaatcccaaaggctgttgattccttcaagggtgttgaaatccttgagggaaatggtggccccggaaccattaagaagatctctttccttgaggatggggaaaccaagtttgtgttgcacaagattgaagcaatcgatgaggctaatttgggatatagctacagcatagttgggggtgttgccttgccacccactgtggagaagatcactttcgattccaaattggttgctggccccaacggaggctccattggcaaagtcactgtcacattccaaaccaaagcagacaatgctcttcccactgaagatgaactcaaaattggcaaagccaagggtgatgcccttttcaaagccattgaggcttaccttttggccaatcctcattacaactga 441 0.0 MAPATLYKALVKDADNLIPKAVDSFKGVEILEGNGGPGTIKKISFLEDGETKFVLHKIEAIDEANLGYSYSIVGGVALPPTVEKITFDSKLVAGPNGGSIGKVTVTFQTKADNALPTEDELKIGKAKGDALFKAIEAYLLANPHYN 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g04056 146 CDD Bet_v1-like 1 139 - -
Pste6g04056 146 Gene3D - 1 146 IPR023393 -
Pste6g04056 146 PRINTS Major pollen allergen Bet V1 signature 52 71 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Pste6g04056 146 PRINTS Major pollen allergen Bet V1 signature 71 84 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Pste6g04056 146 PRINTS Major pollen allergen Bet V1 signature 13 23 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Pste6g04056 146 PRINTS Major pollen allergen Bet V1 signature 36 45 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Pste6g04056 146 PRINTS Major pollen allergen Bet V1 signature 96 112 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Pste6g04056 146 PRINTS Major pollen allergen Bet V1 signature 131 141 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Pste6g04056 146 ProSitePatterns Pathogenesis-related proteins Bet v I family signature. 75 107 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Pste6g04056 146 FunFam Major pollen allergen Bet v 1-A 1 146 - -
Pste6g04056 146 Pfam Pathogenesis-related protein Bet v 1 family 2 142 IPR000916 GO:0006952
Pste6g04056 146 SUPERFAMILY Bet v1-like 2 146 - -
Pste6g04056 146 PANTHER - 2 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g04056 Pste-Chr6 29871609 29873646 Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g04056 6 29871609 29873646 Pste6g04056 6 29871609 29873646 ECH