Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g04034 atgaccatcgacctggattctatcgctcgcagagtcgaggttgataatagcattcccctccgctattactatcggattgccgataacctcctcaagcaggcaagtatctatcgggaagagaataatgtagttgacttgtacatcattcttcttagatttttaagtttggtttccgaaactataccatatcatcgagactatcaagcttcactgcccaacgaaagagcagcatataagaagagatcacgggccgtattggatgagcttgaatctttgaagcctgaatttaaacaccggcctgctggattcggttcacactcttcagggaattataatatgttatcttctgattccaggcctattgacaagcaatttcagaaactatctcttagtctacccccgccaaataaggaaactttgtccagacactcatttttaggaccaaatggcctgcgagctcaatggcttggacctagtgcagaaattaaggtggtagtggttggagactggtggctagtacgcaacattggcagccgatggccaatgattgatgtggccaaaggtggcggtagtggtgatcaaagattggtgacaattgtggccgatgattgggagtcgaatgtggaatggtggtggttagtgattgagggtcaaatgtggtggttcaatatccaagcagtagtgatctcacacatgccaaggattcaagatgatgatcaagaactagttacttccacaatggattcagttctctccttggacgatggaagatggtcacatcctgatgttgagtcctgttctcctgttgtaactgactcaagggaggaccccttacaattgcttaacatcaagcaacctttgcctcctcctgttcttgctcaggtgttcccagagtgtgcccctattcctccttcaaaagttgctgatccaaggccaggaccagctaaatcttctcatgattctggacttggtccaactacatatcaacacctacatattcctgtcaaaatgatggatgattttttgagattagcttcgaaaaacacacggaagaacttagagacatgtggtgttcttgcagggtccctgaaaaaaagggtcttccatatcacgacacttataatcccaaagcaggaatcaacttcagactcgtgttcaacattgaacgaagaagaaatatttgaagttcaagacagcttatcactttttcctttaggttggatacataattcaaagcttctgatttctagtgaagtagtagccaatgaaacttgtgttgctgtcatgtttagagttacacacccgtcacagacttgtttcatgtcatctgtggatctacacactcattactcataccagatcatgttaccagaggcaattgctattgtcatggcccctacagatactacaagtccacatggtatatttcatctatctgatccgggaggtgtgtctgtaattcgtaactgtcaacaacgaggatttcatccccacgaggagcctgaggatggaagtccaatatatgagcactgttctcatgtctatatgaatgctaacttgaagtttgatgttgttgaccttcgagagcgatga 1593 0.0 MTIDLDSIARRVEVDNSIPLRYYYRIADNLLKQASIYREENNVVDLYIILLRFLSLVSETIPYHRDYQASLPNERAAYKKRSRAVLDELESLKPEFKHRPAGFGSHSSGNYNMLSSDSRPIDKQFQKLSLSLPPPNKETLSRHSFLGPNGLRAQWLGPSAEIKVVVVGDWWLVRNIGSRWPMIDVAKGGGSGDQRLVTIVADDWESNVEWWWLVIEGQMWWFNIQAVVISHMPRIQDDDQELVTSTMDSVLSLDDGRWSHPDVESCSPVVTDSREDPLQLLNIKQPLPPPVLAQVFPECAPIPPSKVADPRPGPAKSSHDSGLGPTTYQHLHIPVKMMDDFLRLASKNTRKNLETCGVLAGSLKKRVFHITTLIIPKQESTSDSCSTLNEEEIFEVQDSLSLFPLGWIHNSKLLISSEVVANETCVAVMFRVTHPSQTCFMSSVDLHTHYSYQIMLPEAIAIVMAPTDTTSPHGIFHLSDPGGVSVIRNCQQRGFHPHEEPEDGSPIYEHCSHVYMNANLKFDVVDLRER 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g04034 530 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 327 457 IPR000555 GO:0005515|GO:0008233|GO:0008237
Pste6g04034 530 SUPERFAMILY JAB1/MPN domain 330 484 - -
Pste6g04034 530 ProSiteProfiles MPN domain profile. 331 484 IPR037518 -
Pste6g04034 530 Gene3D Cytidine Deaminase, domain 2 315 530 - -
Pste6g04034 530 SMART pad1_6 330 481 IPR000555 GO:0005515|GO:0008233|GO:0008237
Pste6g04034 530 MobiDBLite consensus disorder prediction 303 324 - -
Pste6g04034 530 CDD MPN_AMSH_like 328 528 IPR044098 GO:0016579|GO:0061578|GO:0070536|GO:0140492
Pste6g04034 530 Pfam USP8 dimerisation domain 4 98 IPR015063 -
Pste6g04034 530 Gene3D - 2 101 - -
Pste6g04034 530 PANTHER AMSH-LIKE PROTEASE 3 528 - -
Pste6g04034 530 FunFam AMSH-like ubiquitin thioesterase 3 316 530 - -
Pste6g04034 530 SUPERFAMILY USP8 N-terminal domain-like 4 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g04034 Pste-Chr6 29628536 29638215 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g04034 6 29628536 29638215 Pste6g04034 6 29628536 29638215 ECH