Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g04026 atggtgggagcgagggacatcgaccacttgccaaagaacgccgccaactacactgcgctaacgcccttgtggtttctagaaagagcggctacggtgcacccaaccagaaactccatcatccatggatctcgtcactacacgtggctacacacttatcatcgctgccgtcgattagcctccgctctctccaaccactccatcggtcttgggaacactgtagctgttattgcacccaacattccagctctgtatgaagcccatttcgggattccaatggcaggggctgtgttaaaccctgttaatgttaggctaaatgcatccacaatagcttttttacttggtcattgcacagctgcagcagtaatagtcgatcaagacttcttttctttggctgaagaagctttgaaaatatggtctgagaaagccaaaaccttcagccctccacttttaatagtcattggtgatgaaaactgtgacccaaaggtacttagatatgctgtgggtaaaggagccattgaatatgaggattttcttcagagtggtgatcctgagtatgcatggaaacccccagaagatgagtggcagagcattgcattgggttacacatctggtaccactgctagtccgaagggtgtggtgttacatcaccgtggagcctatctcatgtcactgagtggagctcttatttggggaatgaccgaaggtgctgtgtatctttggacactgcccatgtttcattgcaatggttggtgttacacttggacacttgctgctctgtgtggtactaacatatgccttcgccaggtaacagcaaaggcagtatatgaatccattgccaagtataaagtgactcatttttgtgcagcaccagtggtgcttaacacaataattaatgccccgccagaggaaacaatacttcctttaccccatgttgtgcatgtgaatacagccggggctgccccgcctccttctgttctttcgggtatgtctgaacgaggatttcgtgtcactcacacgtacggtctctcagaaacctatggcccttcggtctattgtgcctggaaacctgaatgggaatcacttccccctgaaaatcaagcccggctcaatgccagacaaggtgttaggtacattggcttagaaggcctggaagttgtgaatacaaaaaccatgcaacctgttcctgctgatggcaaaactgttggtgagattgtgatgcggggtaattgtgtgatgaaaggatacttaaagaacccaaaagctaatgaggagacctttgcaaatggatggtttcattctggggaccttgctgtgaagcatccagatggatatatagaaattaaagacagatcgaaagacataatcatctctggtgctgaaaatatcagcagtgtagagatagagaatggtctttactcacatcctgcaatactggaggcagcagtagttgcaagagcagatgaaaaatggggtgaatctccctgtgccttcgtgacattaaaggcaggcgtggataaaagcaatgagcagcgtgtaattgaggatatatttaagttctgcagggacaagatgcctgcttattgggttccaaaatcagttgtgtttggacccttacctaagacggctactgggaagatacagaagcatgtactaagggccaaggcgaaagagatgggacctgtcaagatgaccaagttataa 1701 0.0 MVGARDIDHLPKNAANYTALTPLWFLERAATVHPTRNSIIHGSRHYTWLHTYHRCRRLASALSNHSIGLGNTVAVIAPNIPALYEAHFGIPMAGAVLNPVNVRLNASTIAFLLGHCTAAAVIVDQDFFSLAEEALKIWSEKAKTFSPPLLIVIGDENCDPKVLRYAVGKGAIEYEDFLQSGDPEYAWKPPEDEWQSIALGYTSGTTASPKGVVLHHRGAYLMSLSGALIWGMTEGAVYLWTLPMFHCNGWCYTWTLAALCGTNICLRQVTAKAVYESIAKYKVTHFCAAPVVLNTIINAPPEETILPLPHVVHVNTAGAAPPPSVLSGMSERGFRVTHTYGLSETYGPSVYCAWKPEWESLPPENQARLNARQGVRYIGLEGLEVVNTKTMQPVPADGKTVGEIVMRGNCVMKGYLKNPKANEETFANGWFHSGDLAVKHPDGYIEIKDRSKDIIISGAENISSVEIENGLYSHPAILEAAVVARADEKWGESPCAFVTLKAGVDKSNEQRVIEDIFKFCRDKMPAYWVPKSVVFGPLPKTATGKIQKHVLRAKAKEMGPVKMTKL 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g04026 566 Gene3D - 5 452 IPR042099 -
Pste6g04026 566 FunFam 2,3-dihydroxybenzoate-AMP ligase 452 559 - -
Pste6g04026 566 Pfam AMP-binding enzyme 26 457 IPR000873 -
Pste6g04026 566 Pfam AMP-binding enzyme C-terminal domain 466 545 IPR025110 -
Pste6g04026 566 FunFam Long-chain-fatty-acid--CoA ligase FadD 7 452 - -
Pste6g04026 566 Gene3D - 453 560 IPR045851 -
Pste6g04026 566 SUPERFAMILY Acetyl-CoA synthetase-like 13 557 - -
Pste6g04026 566 CDD ttLC_FACS_AEE21_like 17 553 - -
Pste6g04026 566 PANTHER ACYL-ACTIVATING ENZYME 11 561 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g04026 Pste-Chr6 29548996 29555359 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g04026 5 566 Miscellaneous Gene Families AT3G16910 74.956 0.0 909
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g04026 6 29548996 29555359 Pste6g04026 6 29548996 29555359 ECH