Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g03979 atggcatacaccaacaccattgaaagttttgacgttgtttcagacgattctgaccattactttctattaccaggtcctaatccaaattatttcatgaatgcaaatagaaacgtgcacaagaggataatgaaggaatggaaaatgctagctcacaatcttcctgaatccatctacgttcgcgtgtatgagaagctcattgatttgcttagggcagtaatcataggagccactggcacaccctaccacgatggtctcttcttctttcacatagcattcccagttgattcccaaccagcccaccacaggtccattatcgctcttacggattcaatatcaacccgaacctatataacaatggccacgtgtgcttga 372 0.0 MAYTNTIESFDVVSDDSDHYFLLPGPNPNYFMNANRNVHKRIMKEWKMLAHNLPESIYVRVYEKLIDLLRAVIIGATGTPYHDGLFFFHIAFPVDSQPAHHRSIIALTDSISTRTYITMATCA 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g03979 123 SUPERFAMILY UBC-like 32 94 IPR016135 -
Pste6g03979 123 PANTHER (E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME 8 95 - -
Pste6g03979 123 Pfam Ubiquitin-conjugating enzyme 41 94 IPR000608 -
Pste6g03979 123 Gene3D Ubiquitin Conjugating Enzyme 2 97 IPR016135 -
Pste6g03979 123 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 37 123 IPR000608 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g03979 Pste-Chr6 29096864 29097538 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g03979 10 93 Miscellaneous Gene Families AT2G33770 50.000 6.67e-22 87.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g03979 6 29096864 29097538 Pste6g03979 6 29096864 29097538 ECH