Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pste6g03858 | atgaagtcaccaaccactgcaacaactgtcttgaagcaccaaacaactgacaagtccttcaagagtccacccccaccaccacgcctcagacctccttctaacactccaaagtcatcaccacaatcatcaaccacacctaagtcgttgccccctgacttgaagaacgtttctagagccaaaaggggtgctcttgtggggcctcaaaagggtagggaaactcaagagcctaaggctgttgttgttgctaggccacggccaagggtggggcattttggttttaggaagactgaagatgatgaccctgatggaaacaagaagaagaagagggagttgcaggagaagcttgaggtgagtgagaatttcatcaagactttgcaatctgaggtgctggcattgagggaggaattggatagagttaagagtttgaatgtggagcttgagtctcagaacacaaagctcactcagaaccttgctgcttctgaagctaagatatcaactgttagcattgacaacagtggaaaggggccaattgtagaacaccagagtcccaattttaaagacatacagaaactcattgctcaaaaattggaactgtctagaggaaaaaaggaaggtactcctgaagtaattttttctaaagcatcaatctcagctccgaccccaagttatgccattcctgaaactacaagtataggaagaaaatctccacccaatacatgcttgcagccacctcctccaccagcacctccaattactagtgtagaaagaaaatttccgcccaacacatgcctgcagccacctcctcctcctcctccgccaccaccaactccatctaggcctttggcaagactacctaacacccaaaaggcccctgtcattgtcgaattatttcactccttaaggaataaagatgggaagaaagactcagaaggatcagtgaatcatcagagtccagtagttatcagtgcacatagtagtattgtgggagaaattcaaaaccgttcagctcatcttttagcaataagggctgacattgaaacaaaaggagagttcattaatgaccttataaaaaaagtagaagatgcagcattcacggatattgaagaggtcctaaagtttgttgattggcttgatggcaaattatcatcattggctgatgagtgtgctgtcttgaagcattttaattggcctgagaagaaagctgatgcaatgcgagaggcagcagttgagtatcatgagtttaaaatgttagaacaggacatttcctcctacaaggatgaccctgacattccatgtggagcctccttaaaaaagatggccagcctattagacaagtctgagcagagcgtacaaaggttaatcaagctacgaagttcagtcattcattcatatcaaatatacaacattccaactgcatggatgcttgattctggaataacaagcaagataaagcaggcttccatgactctggtcaagacgtacatgaaaagagtgacaatggagcttgaatccattcggaattcagacagagaatctattcaagattctcttctacttcagggtgtgcattttgcgtatagggctcatcagtttgctggaggattggactcggaaacaatgtgtgcttttgaagagataagacaacgtgtaccgggacacctagcaggatctcgagaacttttggctggcataccatag | 1698 | 0.0 | MKSPTTATTVLKHQTTDKSFKSPPPPPRLRPPSNTPKSSPQSSTTPKSLPPDLKNVSRAKRGALVGPQKGRETQEPKAVVVARPRPRVGHFGFRKTEDDDPDGNKKKKRELQEKLEVSENFIKTLQSEVLALREELDRVKSLNVELESQNTKLTQNLAASEAKISTVSIDNSGKGPIVEHQSPNFKDIQKLIAQKLELSRGKKEGTPEVIFSKASISAPTPSYAIPETTSIGRKSPPNTCLQPPPPPAPPITSVERKFPPNTCLQPPPPPPPPPPTPSRPLARLPNTQKAPVIVELFHSLRNKDGKKDSEGSVNHQSPVVISAHSSIVGEIQNRSAHLLAIRADIETKGEFINDLIKKVEDAAFTDIEEVLKFVDWLDGKLSSLADECAVLKHFNWPEKKADAMREAAVEYHEFKMLEQDISSYKDDPDIPCGASLKKMASLLDKSEQSVQRLIKLRSSVIHSYQIYNIPTAWMLDSGITSKIKQASMTLVKTYMKRVTMELESIRNSDRESIQDSLLLQGVHFAYRAHQFAGGLDSETMCAFEEIRQRVPGHLAGSRELLAGIP | 565 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pste6g03858 | 565 | Coils | Coil | 108 | 163 | - | - | |
| Pste6g03858 | 565 | MobiDBLite | consensus disorder prediction | 238 | 254 | - | - | |
| Pste6g03858 | 565 | MobiDBLite | consensus disorder prediction | 35 | 51 | - | - | |
| Pste6g03858 | 565 | MobiDBLite | consensus disorder prediction | 221 | 284 | - | - | |
| Pste6g03858 | 565 | SUPERFAMILY | Formin homology 2 domain (FH2 domain) | 266 | 275 | - | - | |
| Pste6g03858 | 565 | MobiDBLite | consensus disorder prediction | 20 | 34 | - | - | |
| Pste6g03858 | 565 | MobiDBLite | consensus disorder prediction | 221 | 237 | - | - | |
| Pste6g03858 | 565 | MobiDBLite | consensus disorder prediction | 90 | 110 | - | - | |
| Pste6g03858 | 565 | PANTHER | PROTEIN CHUP1, CHLOROPLASTIC | 21 | 552 | IPR040265 | - | |
| Pste6g03858 | 565 | MobiDBLite | consensus disorder prediction | 261 | 281 | - | - | |
| Pste6g03858 | 565 | MobiDBLite | consensus disorder prediction | 1 | 110 | - | - | |
| Pste6g03858 | 565 | MobiDBLite | consensus disorder prediction | 1 | 19 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pste6g03858 | Pste-Chr6 | 27782839 | 27786739 | Wgd |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Pste6g03858 | 6 | 27782839 | 27786739 | Pste6g03858 | 6 | 27782839 | 27786739 | ECH | |
| Pste6g03858 | 6 | 27782839 | 27786739 | Pste2g01130 | 2 | 12309764 | 12315450 | PCT |