Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g03720 atgattaccggtaaggatatttatgatgttttcgcggctattgtgcccctatacgtggctatgatattagcatatggctcagttcggtggtggaaaattttcacacctgatcaatgttctggtataaaccgttttgtggctgtctttgcagttccactgctttctttccacttcatatcctccaacgacccttatgctatgaactaccacttcatagcggctgactctctacaaaaagttgtcattttgggtgctctctttctatggaacacctttacaaaacacggtagtcttgactggaccatcaccctcttctcactttccactcttccaaacacacttgtcatggggatccctctattgaaggccatgtatggggacttttcagggagcctcatggtccaaattgtggtgttgcaaagtgtcatatggtacactctcatgctgttcatgtttgaatatagaggcgccaaactcctcatcacagaacagttccctgagactgcaggctccatcacctccttcagagttgactcggatgttgtctcactcaatggtagagagccgctgcaaacagatgctgagataggagaagatggaaaactccatgtggtggttaaaagatcagctgcttcttccatgatatcttctttcaacaagtctcatttaacttccatgacaccaagagcatccaatctcactggggttgagatctattctgttcagtcatcgagagaaccaaccccaagagcttctagtttcaaccaaacagatttttatgccatgtttacaagcaaggcacccagtccaaaacatggctacacaaacagtttccagagcaataatggtattggtgatgtttactcgttgcaatcttctaaaggggcaacaccaaggacttcgaattttgaagaggagaccttgaagatgcataagaagagaggagggaggagcatgagtggagagctgtttaacaatggcggtttggtttcttcttacccacctccgaatccaatgttttcaggatctaccagtgctggaggtcctaaaaagaaagatagtaatactaatggcggtgcagcgcctaacaaggagttacacatgtttgtttggagttcaagtgcatcaccagtttctgaggggaatctgaggcatgcagttaatagagctgcctctaccgactttggaacagtcgatccttctaaggctgttccacatgaaactgttgcctcaaaagctgttcacgaattgattgagaagatgagtcctggtcgtagagggagcggagagagggatgttgaaatggatgaaggagccaaatttccgacaagtggatctccatacacatgccagaagaaagttgacatggaagatggcaatgtaaacagaaaccaacagatgccacccgcaagtgtcatgacaagactcatcctcatcatggtttggagaaaactcataagaaatcctaatacctactccagtcttttgggactcgcttggtctctcatatcatttaggtggcacatcgaaatgccaactattgtaaaaggttccatctcaatactgtctgatgctggtctgggaatggccatgttcagtctaggcttgttcatggcgttacaacccaagatcattgcctgtggaaaatctgtggcagcattttctatggctgttaggttcttgacaggtccagctgtgattgctgcaacctcaataggcattggaatccgtggagttcttttgcacgtagcaattgtccaggctgcccttccccaaggtatcgttccctttgtgttcgccaaagaatataatctccatgcagatatacttagtactgcggttatatttgggatgctgattgcattgcccataaccatactctactatgtgctgcttggagtctaa 1905 0.0 MITGKDIYDVFAAIVPLYVAMILAYGSVRWWKIFTPDQCSGINRFVAVFAVPLLSFHFISSNDPYAMNYHFIAADSLQKVVILGALFLWNTFTKHGSLDWTITLFSLSTLPNTLVMGIPLLKAMYGDFSGSLMVQIVVLQSVIWYTLMLFMFEYRGAKLLITEQFPETAGSITSFRVDSDVVSLNGREPLQTDAEIGEDGKLHVVVKRSAASSMISSFNKSHLTSMTPRASNLTGVEIYSVQSSREPTPRASSFNQTDFYAMFTSKAPSPKHGYTNSFQSNNGIGDVYSLQSSKGATPRTSNFEEETLKMHKKRGGRSMSGELFNNGGLVSSYPPPNPMFSGSTSAGGPKKKDSNTNGGAAPNKELHMFVWSSSASPVSEGNLRHAVNRAASTDFGTVDPSKAVPHETVASKAVHELIEKMSPGRRGSGERDVEMDEGAKFPTSGSPYTCQKKVDMEDGNVNRNQQMPPASVMTRLILIMVWRKLIRNPNTYSSLLGLAWSLISFRWHIEMPTIVKGSISILSDAGLGMAMFSLGLFMALQPKIIACGKSVAAFSMAVRFLTGPAVIAATSIGIGIRGVLLHVAIVQAALPQGIVPFVFAKEYNLHADILSTAVIFGMLIALPITILYYVLLGV 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g03720 634 MobiDBLite consensus disorder prediction 325 361 - -
Pste6g03720 634 Pfam Membrane transport protein 10 629 IPR004776 GO:0016020|GO:0055085
Pste6g03720 634 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 633 - -
Pste6g03720 634 NCBIfam auxin efflux carrier 1 633 IPR014024 -
Pste6g03720 634 MobiDBLite consensus disorder prediction 325 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g03720 Pste-Chr6 26366622 26369759 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g03720 102 634 Organic Solute Cotransporters AT5G57090 74.864 0.0 780
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g03720 6 26366622 26369759 Pste6g03720 6 26366622 26369759 ECH
Pste6g03720 6 26366622 26369759 Pste2g01414 2 15424747 15431759 PCT