Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g03653 atgtttcatttctgcatacctaaaggtagaaggcgctctaaatctgatggaagtgactcaagtgaagagaacattcctaagaaggagttggcgcttcaacaagctcttgatcagatcacttccgcatttggaaagggatccatcatgtggctaggtcgtgcggtctcaccaaaaaatgtacctgttgtctctactggttcttttgctcttgatgtagcacttggaattggtggtcttccaaagggacgtgttgtggaaatatatggtcccgaggcatctggaaaaacgactcttgctttacatgtgattgcggaggcacaaaaacaaggaggctattgtgtctttgttgatgctgagcatgcccttgataagaaacttgcagagtctattggtgtgaattcagcgaacttgcttctctcccaacctgattgtggtgaacaagcattaagtcttgtggataccttaattcgtagtggttcagttgatgtaattgttgttgacagtgtggctgctcttgttcctaaaggtgagcttgatggtgaaatgggtgatgctcacatggcaatgcaggctaggttgatgagccaggctcttcgaaaattgagccatgccttgtcgctttctcaatgtatattaatttttataaatcaggtgaggtcaaagatttcaacttttgggggatttagtgggcccactgaagttacttgtggtggtaatgcattgaaattctatgcttctgtgcgactaaatatcaagagaatagggtttgtcaagaagggtgaagagtttgatggaatcaatgatgttctgttctaa 816 0.0 MFHFCIPKGRRRSKSDGSDSSEENIPKKELALQQALDQITSAFGKGSIMWLGRAVSPKNVPVVSTGSFALDVALGIGGLPKGRVVEIYGPEASGKTTLALHVIAEAQKQGGYCVFVDAEHALDKKLAESIGVNSANLLLSQPDCGEQALSLVDTLIRSGSVDVIVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHALSLSQCILIFINQVRSKISTFGGFSGPTEVTCGGNALKFYASVRLNIKRIGFVKKGEEFDGINDVLF 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g03653 271 MobiDBLite consensus disorder prediction 9 25 - -
Pste6g03653 271 ProSiteProfiles RecA family profile 1. 59 218 IPR020588 GO:0003677|GO:0005524|GO:0006281|GO:0140664
Pste6g03653 271 Pfam recA bacterial DNA recombination protein 31 265 IPR013765 GO:0003697|GO:0005524|GO:0006281
Pste6g03653 271 CDD RecA 59 267 IPR013765 GO:0003697|GO:0005524|GO:0006281
Pste6g03653 271 PANTHER RECA 9 266 IPR013765 GO:0003697|GO:0005524|GO:0006281
Pste6g03653 271 NCBIfam recombinase RecA 28 265 IPR013765 GO:0003697|GO:0005524|GO:0006281
Pste6g03653 271 ProSitePatterns recA signature. 240 248 IPR020584 GO:0003677|GO:0005524|GO:0006259|GO:0008094
Pste6g03653 271 ProSiteProfiles RecA family profile 2. 226 265 IPR020587 GO:0003677|GO:0005524|GO:0006259|GO:0008094
Pste6g03653 271 Gene3D - 58 269 IPR027417 -
Pste6g03653 271 SMART AAA_5 81 255 IPR003593 GO:0016887
Pste6g03653 271 PRINTS RecA protein signature 189 218 IPR013765 GO:0003697|GO:0005524|GO:0006281
Pste6g03653 271 PRINTS RecA protein signature 237 265 IPR013765 GO:0003697|GO:0005524|GO:0006281
Pste6g03653 271 PRINTS RecA protein signature 117 146 IPR013765 GO:0003697|GO:0005524|GO:0006281
Pste6g03653 271 PRINTS RecA protein signature 151 180 IPR013765 GO:0003697|GO:0005524|GO:0006281
Pste6g03653 271 MobiDBLite consensus disorder prediction 1 25 - -
Pste6g03653 271 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 31 263 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g03653 Pste-Chr6 25697074 25703871 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g03653 6 25697074 25703871 Pste6g03653 6 25697074 25703871 ECH
Pste6g03653 6 25697074 25703871 Pste2g01350 2 14820645 14826895 PCT