Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g03585 atggcgattttctccgaatccaatcaccatcacaacagttccgatggggtgtcccaacgagtcaacagcccgcgtttctcgggtccaatgactcgccgcggccactccttcaaacgcaacaacaacaacaacagcagcagcagcagcagcaactccaacggcggcagtggcgccggcgaggttgagcttcaaatcaactcgcccagatcggaggaggcgtcggagagtgttccattagggaagcacagtcaccatcacgtgacccagagagtgcacgtgaaggggttgctgaaaaagccccttgcttccattgttgaggatttggggttgaaggaaaggaagaaaattgggcactggatgttcttggcgttctgtggagtgtgtttgttcatgggtgttctcaagatatgtgccactggctggtttggatctgctattgatagagctcaatccaataaggacctatctgactccattgctagtctaaatctaatggaccaaagctcccttggttatgcatatagagggggtgcaagtgatgttgaacgaacattaaaaacagtagtcacgggagaagatggcagccatactgccatggctgaaggttcagggatctggtctaaacccaacagtgacaatttcacccaatgcatagatcttcccagcaattttaaaaagctagacacaaaaaccaatggctacattcttgtaaatgcaaatggtggcctgaatcagatgagatttgggatatgtgatatggttgctgttgctaagattatgaaggcaacacttgttcttccttctcttgatcacaactcctactgggctgatgacagtggtttcaaggatttgtttgattggaagcattttattaatatgctgaaggatgatgtccacatagtggaaaaattacctcctgcctatgctggaattgagcctttcccaaaaactccaatatcttggtccaaggttccgtattataagactgaggttcttcccctcctaaagcaacacaaagtgatatatttcactcatactgattccaggcttgataataatgacattcaatcatccatacagaaactaagatgtcgtgtaaattacagagcattgaaatattcagctcccattgaagaatttggaaacactctggtgccaggttctctaactgcaaaggttagcttttgttgtatggttcttccaaagattcttatcaattgatatgagaaggatatgcttgcatttacaggctgcagtcacaatttgactgcagaagaagatgaagaacttagacagatgcgatatgaagtcagtcactggaaggagaaggagattaatgcaacagagagaagattgcttggaggttgtccgttaactccaagagaaacttccctattacttagagcactgggttttccgtcacataccagaatttatctggtagctggagaagcatatggaagaggaagtatgaaatatcttgaggatgatttccccaacattttctctcattcctctctgtcctctgaagaagagttgaatcctttcaagaatcatcagaacatgttggctggtatagactatgttgttgcccttaagagtgacgtatttgtttatacttatgatggaaatatggcaaaggcagtacaaggtcataggcgctttgaaaactttaagaagaccattaatccagacaagatgaattttgttaaacttgttgatgagttggatgaaggaaaaatttcatggaaaaagttcagctccaaggtaaaaaagcttcacaaagatcgaatcggtgctccgtatccaagggagcgtggagaatttccaaaactggaggaaagtttttatgcaaatcctctgcctggatgtatttgcgaaacaagatag 1890 0.0 MAIFSESNHHHNSSDGVSQRVNSPRFSGPMTRRGHSFKRNNNNNSSSSSSNSNGGSGAGEVELQINSPRSEEASESVPLGKHSHHHVTQRVHVKGLLKKPLASIVEDLGLKERKKIGHWMFLAFCGVCLFMGVLKICATGWFGSAIDRAQSNKDLSDSIASLNLMDQSSLGYAYRGGASDVERTLKTVVTGEDGSHTAMAEGSGIWSKPNSDNFTQCIDLPSNFKKLDTKTNGYILVNANGGLNQMRFGICDMVAVAKIMKATLVLPSLDHNSYWADDSGFKDLFDWKHFINMLKDDVHIVEKLPPAYAGIEPFPKTPISWSKVPYYKTEVLPLLKQHKVIYFTHTDSRLDNNDIQSSIQKLRCRVNYRALKYSAPIEEFGNTLVPGSLTAKVSFCCMVLPKILINXYEKDMLAFTGCSHNLTAEEDEELRQMRYEVSHWKEKEINATERRLLGGCPLTPRETSLLLRALGFPSHTRIYLVAGEAYGRGSMKYLEDDFPNIFSHSSLSSEEELNPFKNHQNMLAGIDYVVALKSDVFVYTYDGNMAKAVQGHRRFENFKKTINPDKMNFVKLVDELDEGKISWKKFSSKVKKLHKDRIGAPYPRERGEFPKLEESFYANPLPGCICETR 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g03585 629 MobiDBLite consensus disorder prediction 1 85 - -
Pste6g03585 629 MobiDBLite consensus disorder prediction 1 26 - -
Pste6g03585 629 FunFam O-fucosyltransferase 28 365 565 - -
Pste6g03585 629 CDD O-FucT_plant 234 561 IPR024709 -
Pste6g03585 629 PANTHER OS02G0726500 PROTEIN-RELATED 111 627 - -
Pste6g03585 629 MobiDBLite consensus disorder prediction 34 60 - -
Pste6g03585 629 Pfam GDP-fucose protein O-fucosyltransferase 234 555 IPR019378 -
Pste6g03585 629 PIRSF UCP009360 81 629 IPR024709 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g03585 Pste-Chr6 24922420 24928958 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g03585 205 626 Miscellaneous Gene Families AT2G37980 65.166 0.0 595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g03585 6 24922420 24928958 Pste6g03585 6 24922420 24928958 ECH
Pste6g03585 6 24922420 24928958 Pste2g01263 2 13950603 13954909 PCT