Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g03502 atggccaccgatcgtttgacccgtgttcacagtctccgagagaggcttgatgaaaccctcactgcaaacaggaacgaaattttggcccttctgtcaaggatcgaagccaagggcaaggggatcctgcaacaccatcaggtcattgctgagtttgaggaaatccctgaagagaacagacagaagcttattgatggtgcctttggagaagttttgagatctacacaggaagccatagttttgccaccatgggttgctctggctgttcgtccaaggcctggtgtgtgggagtacctaagagtgaatgtgcacgctcttgttgttgaggagttgcaacctgctgagtacctgcgcttcaaagaagaacttgttgatggaagttctaatggcaactttgtgcttgagttggactttgaaccattcactgcatccttcccccgcccaactcttaacaagtcaatcggaaatggtgtgcaattcctcaaccgccacctttcagccaaactcttccacgacaaggagagcttgcacccacttttggaatttctcaggcttcacagctacaagggaaagactttgatgttgaatgacagaattcaaaacccagacgctctccaacatgttctgaggaaagccgaggagtatcttggctcattgcctgctgatactccctactcagaatttgagcacaagttccaggagattggtttggagagagggtggggtgacaccgcagagcgtgtccttgagtcaattcaacttctcttggatcttctcgaggctcctgacccgtgcacccttgagactttccttggaagaatccctatggttttcaacgttgttattctttctccccatggttactttgcccaagataatgtgttgggataccctgacactggtggccaggttgtttacatcttggatcaagttcgtgctttggagaatgaaatgctccatcgcattaagcaacaaggattggacattgttcctcgcattctcattatcacccgtcttctccccgatgcagtaggaactacttgtggccaacgtcttgagaaggtgttcggaactgagcactcccatattcttcgtgttccctttagagatgagaagggaatggtacgcaagtggatctcaagatttgaagtctggccatatttggaaacttacactgaggatgttgctcatgagcttgccaaggagttgcaaggcaaaccagatctgatagttggaaactacagtgacggaaacattgttgcctctttgttggcacataaattaggtgtcactcagtgtaccattgcacatgcacttgagaagaccaaataccccgaatccgacatttactggaaaaaattcgaagagaaataccacttctcttgccaattcacagccgatctctttgccatgaaccacacagatttcattattaccagtaccttccaagagattgctggaagcaaggatacagttggacagtatgagagtcacactgccttcacccttccaggactgtaccgtgttgtgcacggtattgatgtctttgatccaaaattcaacatcgtgtcccctggagctgatcagacaatttacttcccatacacggacactagccgtaggttgacagcgttccacccggaaatagaagagcttctttacagttcagtggagaatgaagaacacatatgtgtgctgaaggaccggaacaagccaattatcttcacaatggcaaggttggaccgtgtgaagaacataacaggacttgtggagtggtatgggaagaacgcaaagttgagggagttggtgaacctggtggtggttgcaggagacaggaggaaggagtcgaaggacttggaagagaaggcggagatgaagaagatgtatgggctgatagagacctacaagttgaacgggcaattcagatggatttcgtctcagatgaaccgtgtgaggaatggagagctataccgtgtgatatgtgacacaaagggtgcttttgtgcagccagcagtgtatgaggcctttggtttgacagtggttgaggccatgacttgtggcttgccaacatttgccacatgcaatggtggtcctgccgagatcattgtccatggcaagtctggcttcaacattgacccttaccatggcgaccgtgctgctgacctccttgttgaattctttgagaagtgcaaggttgatccctctcactgggacaacatctctcagggtggtctccagcgtattgaagagaagtacacatggcaaatttactctcagaggcttctcactctcactggtgtctatggcttctggaagcatgtttctaaccttgaccgccgtgagagccgccgctatctcgagatgttctacgctctcaaataccgcaaattggctgagtctgtgccccttgctgttgagtaa 2418 0.0 MATDRLTRVHSLRERLDETLTANRNEILALLSRIEAKGKGILQHHQVIAEFEEIPEENRQKLIDGAFGEVLRSTQEAIVLPPWVALAVRPRPGVWEYLRVNVHALVVEELQPAEYLRFKEELVDGSSNGNFVLELDFEPFTASFPRPTLNKSIGNGVQFLNRHLSAKLFHDKESLHPLLEFLRLHSYKGKTLMLNDRIQNPDALQHVLRKAEEYLGSLPADTPYSEFEHKFQEIGLERGWGDTAERVLESIQLLLDLLEAPDPCTLETFLGRIPMVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLHRIKQQGLDIVPRILIITRLLPDAVGTTCGQRLEKVFGTEHSHILRVPFRDEKGMVRKWISRFEVWPYLETYTEDVAHELAKELQGKPDLIVGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPESDIYWKKFEEKYHFSCQFTADLFAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADQTIYFPYTDTSRRLTAFHPEIEELLYSSVENEEHICVLKDRNKPIIFTMARLDRVKNITGLVEWYGKNAKLRELVNLVVVAGDRRKESKDLEEKAEMKKMYGLIETYKLNGQFRWISSQMNRVRNGELYRVICDTKGAFVQPAVYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFNIDPYHGDRAADLLVEFFEKCKVDPSHWDNISQGGLQRIEEKYTWQIYSQRLLTLTGVYGFWKHVSNLDRRESRRYLEMFYALKYRKLAESVPLAVE 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g03502 805 Gene3D - 25 145 - -
Pste6g03502 805 FunFam Sucrose synthase 280 545 - -
Pste6g03502 805 Gene3D Glycogen Phosphorylase B; 280 796 - -
Pste6g03502 805 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 295 763 - -
Pste6g03502 805 FunFam Sucrose synthase 11 145 - -
Pste6g03502 805 Gene3D - 146 275 - -
Pste6g03502 805 NCBIfam sucrose synthase 24 802 IPR012820 GO:0005985|GO:0016157
Pste6g03502 805 Gene3D Glycogen Phosphorylase B; 527 753 - -
Pste6g03502 805 FunFam Sucrose synthase 146 275 - -
Pste6g03502 805 Pfam Glycosyl transferases group 1 564 732 IPR001296 GO:0016757
Pste6g03502 805 PANTHER - 7 803 IPR012820 GO:0005985|GO:0016157
Pste6g03502 805 Pfam Sucrose synthase 8 553 IPR000368 GO:0005985|GO:0016157
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g03502 Pste-Chr6 23785368 23790432 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g03502 6 805 Glycosyltransferase AT3G43190 85.250 0.0 1431
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g03502 6 23785368 23790432 Pste6g03502 6 23785368 23790432 ECH
Pste6g03502 6 23785368 23790432 Pste2g01205 2 13075082 13079985 PCT