Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g03102 atgggttgtcagataaggcttctgggtctgtgtctatggatgtacttggcaagtttgagtttcattggagtgggtgctgtgtatggaagggtaggagcttttgagaaagggattattttagttcatgggaaaaatgctattgggaagattgatgatgattttgtctgtgcaactctggattggtggcctcctcagaaatgcgactatggaaaatgcagttggggtcatgcttctttgctcaatctggacctcaacaacaaaattttgctaaatgcagtaaaagccttttcacccttgaaaattagactaggtggcactttgcaagacaaggtcatatatggaactgaagataatcagcaaccctgtactccctttattttaaatgcgaatgaaatgtttggtttcactcaagggtgcttaccgatgtataggtgggatgagctaaacagctttttccaaaaaacaggggcaaaggtcatctttggattaaatgctctttctggaaaatctataaagtctggttctgctgttggaccttggaactgcaccaatgctgaatctttaattcgatacactgtcagaaagaaattcaccattcatggttgggaacttggcaatgaattgtgtggaaatggaattggagcaagtgttgcagcagatcaatacgcttctgatgtaattgctttaagaaatatagttcaaaatgcatatagaggggttcaaccaaagccactagtcattgctcctggaggcttctttgactcagattggttcaaggaatttctaagcaaatctggtaaatctgctgatgtgatcacccaccacatttataatcttggaccaggagttgatgaccacctaactgaaagaattcttgacccatcctatctggatggagaggctaacacattccgcagcctcaaaggtatacttcaaagttcagcaacctcagtaaaatcatgggttggtgaggcaggaggggcttacaatagtggccatcatcttgtgtctgatgcatttgtctacagcttctggtatttggaccagcttggcatgtcagccgtttatgacaccaaaacatactgcagacaaagtttgataggaggaaactatggtttgctgaatactagtactttcatgccaaatccagactattatagtgcacttctatggcaccgactcatgggaaggcgtgtcctatcaactaccttctatgggacaaagaacataagaacttattcgcactgtgcaaaggaatccaagggaatcacaatactattgctcaacttggacaacagcaccactgttcaagtctacgtggccttaaaatttaacaagttaccttaccgtagagtgggtgaaccagccagaagagagtaccatttaacagcaccagacaggaatttacagagccaaaccatgttgctaaatggaaaaatgttaagtgtaaactcagctggtgaaattcctactttggagcctctatatgtagactcaacaaaaccaataatagttggtcctctatctattgtatttgctcatataccaaatgttcttctttcggcttgcggctag 1575 0.0 MGCQIRLLGLCLWMYLASLSFIGVGAVYGRVGAFEKGIILVHGKNAIGKIDDDFVCATLDWWPPQKCDYGKCSWGHASLLNLDLNNKILLNAVKAFSPLKIRLGGTLQDKVIYGTEDNQQPCTPFILNANEMFGFTQGCLPMYRWDELNSFFQKTGAKVIFGLNALSGKSIKSGSAVGPWNCTNAESLIRYTVRKKFTIHGWELGNELCGNGIGASVAADQYASDVIALRNIVQNAYRGVQPKPLVIAPGGFFDSDWFKEFLSKSGKSADVITHHIYNLGPGVDDHLTERILDPSYLDGEANTFRSLKGILQSSATSVKSWVGEAGGAYNSGHHLVSDAFVYSFWYLDQLGMSAVYDTKTYCRQSLIGGNYGLLNTSTFMPNPDYYSALLWHRLMGRRVLSTTFYGTKNIRTYSHCAKESKGITILLLNLDNSTTVQVYVALKFNKLPYRRVGEPARREYHLTAPDRNLQSQTMLLNGKMLSVNSAGEIPTLEPLYVDSTKPIIVGPLSIVFAHIPNVLLSACG 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g03102 524 Pfam Glycosyl hydrolase family 79, N-terminal domain 38 351 IPR005199 GO:0016020|GO:0016798
Pste6g03102 524 SUPERFAMILY (Trans)glycosidases 50 395 IPR017853 -
Pste6g03102 524 FunFam heparanase-like protein 3 74 393 - -
Pste6g03102 524 PANTHER HEPARANASE-RELATED 36 523 - -
Pste6g03102 524 Gene3D Glycosidases 72 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g03102 Pste-Chr6 19253344 19257887 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g03102 34 523 Glycoside Hydrolase AT5G61250 47.961 5.44e-175 502
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g03102 6 19253344 19257887 Pste6g03102 6 19253344 19257887 ECH
Pste6g03102 6 19253344 19257887 Pste2g01011 2 10742745 10747812 PCT