Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02917 atgctttgcaaaggtccccttccgccccaacaaacgacgtcgtctgtaacagcacctttgaagcctccccacaccaccatgtccataaagctccactctcacgccttctctggcaaccctcttctctccaaattcccactttccggggataccctttccccctctgcagctctccaagccctcaacgctcgaattgctttaaacaaaactcattcctctccctccccgaccttcaaggtgcttcctttcagaagcggaaggccattggcttcttcccagcccggcaacgccaactcgccgccgagttggcatctgggttggctcgggttgcacgaactcaggggtattttcgataattccggtgcccagttgagtacagactcgttggtgtatctgaattcgagtgcagaggacgatgccgtttactgggcaatcgatgtttcagctgaggtgcctgaattgggtggcaacgacacggggttatattttgtggagcttcgaacgctcatggtagctaccgactggttggatttgcaagcaatgggaaacttggctattgctggtcatgctaaggcgctgctagaatggcataatgcttcacgattttgtgggcattgtggagagaaaacagtcccaatggaagctgggagacggaaacaatgttcaaatgattcatgcaaaaagaggatatatccacgtgttgatcccgtggtaattatgctcgtaattgatagagagaatgaccgtgctcttttggctaaacgaccaatgcgtttaactcgattgtatacctgcttatcaggcttcacagagccaggagaaagcttggaggaagctgtaagaagagaaacatgggaagagactggtattgaagtaggagaagttgtatatcacagttctcagccatggcctgatgctcagtggttcagtagagaagatgtaagaaaagcattgacttttgctaaatacaagcaagcccaaataactgcagcagagaaggtcgagcaaatgtgtgagggacttgaaaagaatcgaagcttggcttcagatctcaacgtggaaagttctgatgaacatgctccgatagttgttcctggaccctttgcaatagcccatcaccttatttctttttgggccctctcagatcaaaatgtagtaaatggtgttgaatgcaattaa 1179 0.0 MLCKGPLPPQQTTSSVTAPLKPPHTTMSIKLHSHAFSGNPLLSKFPLSGDTLSPSAALQALNARIALNKTHSSPSPTFKVLPFRSGRPLASSQPGNANSPPSWHLGWLGLHELRGIFDNSGAQLSTDSLVYLNSSAEDDAVYWAIDVSAEVPELGGNDTGLYFVELRTLMVATDWLDLQAMGNLAIAGHAKALLEWHNASRFCGHCGEKTVPMEAGRRKQCSNDSCKKRIYPRVDPVVIMLVIDRENDRALLAKRPMRLTRLYTCLSGFTEPGESLEEAVRRETWEETGIEVGEVVYHSSQPWPDAQWFSREDVRKALTFAKYKQAQITAAEKVEQMCEGLEKNRSLASDLNVESSDEHAPIVVPGPFAIAHHLISFWALSDQNVVNGVECN 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02917 392 Gene3D - 107 232 - -
Pste6g02917 392 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 233 378 - -
Pste6g02917 392 PANTHER NUDIX HYDROLASE, NUDC SUBFAMILY 305 383 - -
Pste6g02917 392 Pfam NADH pyrophosphatase zinc ribbon domain 200 230 IPR015376 GO:0016787|GO:0046872
Pste6g02917 392 MobiDBLite consensus disorder prediction 7 22 - -
Pste6g02917 392 FunFam Nudix hydrolase 19, chloroplastic 92 232 - -
Pste6g02917 392 Pfam NUDIX domain 237 310 IPR000086 -
Pste6g02917 392 MobiDBLite consensus disorder prediction 1 24 - -
Pste6g02917 392 Pfam NADH pyrophosphatase-like rudimentary NUDIX domain 80 196 IPR015375 GO:0016787
Pste6g02917 392 SUPERFAMILY Nudix 184 320 IPR015797 -
Pste6g02917 392 ProSiteProfiles Nudix hydrolase domain profile. 232 365 IPR000086 -
Pste6g02917 392 CDD NADH_pyrophosphatase 236 379 - -
Pste6g02917 392 ProSitePatterns Nudix box signature. 268 289 IPR020084 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02917 Pste-Chr6 16965469 16970040 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g02917 6 16965469 16970040 Pste6g02917 6 16965469 16970040 ECH
Pste6g02917 6 16965469 16970040 Pste2g00197 2 1046718 1047425 PCT