Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02896 atgaacaaggttttagaagtatcaacattgggtgcaaagaaaagtctggtgtggagaggatggaatcaagggaggaccaaaggtaatattattttgtcagattgttctgaagacactcctgaacatgtctctcctgatttattgcatggtaaggagtacggttttggtgctcatgacttcccagccagtggagtttttgaagtggagccaaggaagtgccctggattcatatatagatgttccatcactttgggtcaaaccaatatgagtccttttgagtttcacgatctctccaatagattgactgggaaacaaatcccaggttgggtgaatcgacttgctaagctgggtgctttgtgcagctgtctacttcctgaaagtcttcaagtaacaagtgttaaacagctacctgaataccacgagtgctcggaagatgagtttgttgaatctctttcacctgccacaccctgcatgtcaactgaaatagaggatgagcaagagatgcaccttctttcaccatcagctggaactgaggatgttacatttgttaaagagaaccaagtaaaataa 570 0.0 MNKVLEVSTLGAKKSLVWRGWNQGRTKGNIILSDCSEDTPEHVSPDLLHGKEYGFGAHDFPASGVFEVEPRKCPGFIYRCSITLGQTNMSPFEFHDLSNRLTGKQIPGWVNRLAKLGALCSCLLPESLQVTSVKQLPEYHECSEDEFVESLSPATPCMSTEIEDEQEMHLLSPSAGTEDVTFVKENQVK 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02896 189 ProSiteProfiles PPPDE domain profile. 1 166 IPR008580 GO:0008233
Pste6g02896 189 Gene3D PPPDE domains 42 99 IPR042266 -
Pste6g02896 189 SMART DUF862_2a 2 129 IPR008580 GO:0008233
Pste6g02896 189 Pfam PPPDE putative peptidase domain 48 97 IPR008580 GO:0008233
Pste6g02896 189 PANTHER DESUMOYLATING ISOPEPTIDASE 49 96 IPR008580 GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02896 Pste-Chr6 16783125 16787352 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g02896 6 16783125 16787352 Pste6g02896 6 16783125 16787352 ECH
Pste6g02896 6 16783125 16787352 Pste2g00218 2 1198670 1202353 PCT