LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pste6g02787	atggacaagctcttccatcctcccaaacccccttccgcctccagttcatctggagtgcagttagcatggagtagtaagaaacgtccttaccagtcaggggcaatggagttgaatcggagagggatgttgttgagggacagcagccatcctcagcttcggacaaggcactgcagggatcgctctgccgaccgtgggatcgtgatagtgagtgctgtaaattgtgctagtagaggttggatcaatgtggatattgacaccatagtctgtgaagcatgtggggctcgtcttcttttctctacatcagcatcttggaatcagcaacaagtggagaaggcagcattggtctttagcttaaagttggataatggacataaattactttgcccatggattgataatgcctgtaatgaaacactggcacgatttcctcctacaactcctccaatattagttgacaatttcagagaatgctgtttgactctcttgcaactgtcagctcttccatgcatttcattttcagcaatagactacatgaaaagccaaagcccacttctggaagactttcttggacaatctttgatgctggaatgtggaaatggatctgctgaaaattctgggtttggggatgttagtagtcaagaggaactgaaatcatattatcaggctcaaaagcttataagtttatgcggttggaaacttcgtcctctaccctatgtagttgattggaaggatatcccagatcagtctcttaaaaacacatctaatcttgctgtccattcttctggcactgatcaaaatttaaaaatagatgaaaattccaaggattttattggggaacaaatcgatcccaattctgcagtattagattgcagtctatgtggagccactattggattatgggcattctgtacagttcctcgacctgtggaatcaattagattagtgggatatgctgaagtgaatggtgaaaatccttctgtggccctcaatttattgaataaaaatgatcttgaaaataggcagggtgttaataataccatgcctgatgttgcaaattcatcaaaggatacttcttcaagtctaaatatgacaattgcagggggtcctcccccaacaaagcaaaactttaaagcaatcatatctcttcctgttattggtcagaatttaagggctcgtatttcttatgattctgattttagggatcatgtttttgttgaccaaggtggtattcaatcagagttacagcaggagaaaactgataatactgctaatgcttctattggacaacttgttccagtgtcacctgaaatcagggagatatcaaattatgaaactggttctcaagcaagtattcatgattcagatgttatagagggaaaatcttctgctcttaaggataagaggcctgcacaaacagatgctgataaattgaatagttcagcagcaggatatcctagtagttctcagaaagactctatagaaggtgaagcactttcgcacaagactttggatggcaaagttggtagtcttcaaaattatggggtcaaagacagagaagagaatcctgttagcagtgttgatggacattctagttcagggaagtttaagaactccccagtgtctgataacgcaatggaatttgatccaatcaggcagcatagacacttctgcccctggattgcatcaataaatgatggggaacctgggtggaaacaaacgttatctgctctgtatcatcagaaaaaccattttctgcattcgcccaatagatctccatcatcaatgcccattgttaagaagtga	1803	0.0	MDKLFHPPKPPSASSSSGVQLAWSSKKRPYQSGAMELNRRGMLLRDSSHPQLRTRHCRDRSADRGIVIVSAVNCASRGWINVDIDTIVCEACGARLLFSTSASWNQQQVEKAALVFSLKLDNGHKLLCPWIDNACNETLARFPPTTPPILVDNFRECCLTLLQLSALPCISFSAIDYMKSQSPLLEDFLGQSLMLECGNGSAENSGFGDVSSQEELKSYYQAQKLISLCGWKLRPLPYVVDWKDIPDQSLKNTSNLAVHSSGTDQNLKIDENSKDFIGEQIDPNSAVLDCSLCGATIGLWAFCTVPRPVESIRLVGYAEVNGENPSVALNLLNKNDLENRQGVNNTMPDVANSSKDTSSSLNMTIAGGPPPTKQNFKAIISLPVIGQNLRARISYDSDFRDHVFVDQGGIQSELQQEKTDNTANASIGQLVPVSPEIREISNYETGSQASIHDSDVIEGKSSALKDKRPAQTDADKLNSSAAGYPSSSQKDSIEGEALSHKTLDGKVGSLQNYGVKDREENPVSSVDGHSSSGKFKNSPVSDNAMEFDPIRQHRHFCPWIASINDGEPGWKQTLSALYHQKNHFLHSPNRSPSSMPIVKK	600

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pste6g02787	600	MobiDBLite	consensus disorder prediction	1	21	-	-
	Pste6g02787	600	Pfam	C3HC zinc finger-like	69	165	IPR012935	GO:0008270
	Pste6g02787	600	MobiDBLite	consensus disorder prediction	525	539	-	-
	Pste6g02787	600	MobiDBLite	consensus disorder prediction	443	541	-	-
	Pste6g02787	600	MobiDBLite	consensus disorder prediction	458	473	-	-
	Pste6g02787	600	PANTHER	NUCLEAR-INTERACTING PARTNER OF ALK	69	593	-	-
	Pste6g02787	600	MobiDBLite	consensus disorder prediction	474	493	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pste6g02787	Pste-Chr6	15549634	15554323	Dispersed

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pste6g02787	6	15549634	15554323	Pste6g02787	6	15549634	15554323	ECH