Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02769 atgctagagctagcggcacttcttaggtctctggggttgaagccatggggagagcaagtccaagaactgttggccaacatggactcaaatggcaatgggaaagtggagtttgatgagttggtgaaggccatattacctgacataataaatgcacaagtattgctgaaccaagaacagctcttggggctgttcaagtgcttcgatcgtgatggaaatggttacatatcagcagcagagttggccggggcaatggccaaaatgggccagcccctcacatga 279 0.0 MLELAALLRSLGLKPWGEQVQELLANMDSNGNGKVEFDELVKAILPDIINAQVLLNQEQLLGLFKCFDRDGNGYISAAELAGAMAKMGQPLT 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02769 92 ProSitePatterns EF-hand calcium-binding domain. 28 40 IPR018247 -
Pste6g02769 92 PANTHER CALCIUM BINDING PROTEIN 56 91 - -
Pste6g02769 92 Pfam EF-hand domain pair 6 41 IPR002048 GO:0005509
Pste6g02769 92 ProSiteProfiles EF-hand calcium-binding domain profile. 15 50 IPR002048 GO:0005509
Pste6g02769 92 Pfam EF hand 63 87 IPR002048 GO:0005509
Pste6g02769 92 Gene3D - 55 92 - -
Pste6g02769 92 FunFam Calmodulin-2 A 1 92 - -
Pste6g02769 92 ProSitePatterns EF-hand calcium-binding domain. 68 80 IPR018247 -
Pste6g02769 92 SMART efh_1 59 87 IPR002048 GO:0005509
Pste6g02769 92 SMART efh_1 19 47 IPR002048 GO:0005509
Pste6g02769 92 ProSiteProfiles EF-hand calcium-binding domain profile. 55 90 IPR002048 GO:0005509
Pste6g02769 92 SUPERFAMILY EF-hand 3 92 IPR011992 -
Pste6g02769 92 Gene3D - 1 52 - -
Pste6g02769 92 CDD EFh 3 44 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02769 Pste-Chr6 15371769 15372455 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g02769 1 92 EF-hand Containing Proteins AT1G18530 78.261 7.05e-46 142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g02769 6 15371769 15372455 Pste6g02769 6 15371769 15372455 ECH