Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02727 atgggttgggccatagctctacacggcggcgccggcgacatacccctctcactgccagcggagatgcggaagccgcgagaggaggctctccggcactgcctccaaattgccgtggaagctctgaaagccaaagtaggtcctctggacgtggttgagctcgtggttcgggagttggagaacattccgcactttaacgcggggaaaggatctgtgctgacttcgaaaggcacagtggaaatggaagcttccataatggacggcgccactatgaattgcggagccgtttccggcctcaccaccgtcctcaaccccatctctctcgctcgattggttatggataagacgcctcatatttatctcgctttcgatggagcccaagactttgcaagacaacaaggcgttcccactctggattcaacccattttattactgcacataatattcagaggcttaaccaggcaaagcaagcccatacggtccagattgattatacccagcctattcaaaattatactaagaaagagacgctatttgctaatagtgatagtcaaattgggactgttgggtgtgtggctgttgatggccttgggaatttggcttctgcaacatccactggtggattagtcaacaaaatggtgggtcgaattggtgacacgccgctcataggtgctgggacctacgccgatgcacgttgtgcggtttctgctacaggcaaaggtgaagcaataatacgtgggacagtggcaagggatgtggctgctctcatggagtttaagggtctttcgcttcaggaagctgctacttgtgttgtacacgagcgcacaccaaaaggcactgttggtttgattgctgtgtctgccaaaggagaagttgcaatgccttttaatacaacaggcatgttccgagcatgtgctactgaagacgggtattctgagattgcaatttggcctgctgcacaagttgaatga 969 0.0 MGWAIALHGGAGDIPLSLPAEMRKPREEALRHCLQIAVEALKAKVGPLDVVELVVRELENIPHFNAGKGSVLTSKGTVEMEASIMDGATMNCGAVSGLTTVLNPISLARLVMDKTPHIYLAFDGAQDFARQQGVPTLDSTHFITAHNIQRLNQAKQAHTVQIDYTQPIQNYTKKETLFANSDSQIGTVGCVAVDGLGNLASATSTGGLVNKMVGRIGDTPLIGAGTYADARCAVSATGKGEAIIRGTVARDVAALMEFKGLSLQEAATCVVHERTPKGTVGLIAVSAKGEVAMPFNTTGMFRACATEDGYSEIAIWPAAQVE 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02727 322 PANTHER L-ASPARAGINASE 3 303 IPR000246 GO:0016787
Pste6g02727 322 CDD Asparaginase_2 4 309 - -
Pste6g02727 322 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 3 316 IPR029055 -
Pste6g02727 322 Pfam Asparaginase 3 316 IPR000246 GO:0016787
Pste6g02727 322 FunFam Isoaspartyl peptidase/L-asparaginase 187 318 - -
Pste6g02727 322 Gene3D (Glycosyl)asparaginase 187 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02727 Pste-Chr6 14835237 14836969 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g02727 5 294 Miscellaneous Gene Families AT4G00590 28.049 2.30e-16 77.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g02727 6 14835237 14836969 Pste6g02727 6 14835237 14836969 ECH